Gene Information

Name : Desor_3208 (Desor_3208)
Accession : YP_004971227.1
Strain : Desulfosporosinus orientis DSM 765
Genome accession: NC_016584
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3320267 - 3322819 bp
Length : 2553 bp
Strand : -
Note : PFAM: MutS family domain IV; MutS domain II; MutS domain V; MutS domain I; MutS domain III; TIGRFAM: DNA mismatch repair protein MutS

DNA sequence :
ATGACGACCCCGATGATGCAGCAGTATCACCTTATTAAAGAGAAAGTCCCGGACGCCATTCTTTTTTTTCGCTTAGGTGA
TTTTTATGAGATGTTTGGTGAAGATGCTGAAGTCGCTGCCCCCATCCTGCAAATTGCCTTAACAGGAAGGGATGCCGGGG
AAGGAAAGCGAATTCCTATGTGTGGAGTTCCTTACCATGCTGTGGACAATTATTTGTCCAAGCTCGTAAAGTCCGGCCAT
AAAGTTGCTATTTGCGAACAAGTGGAAGATGCTAAAGCTTCTAAAGGCATTGTTAAACGTGATATCATCCGGATTGTATC
CCCGGGGACTCTGACAGAAGCTGTTGCGGAACGTTCCAATCATTATTTAGCCAGTATCTATTTTGCTGATCACTGGGGAC
TTGCTTTTCTGGATTTATCAACGGGTGAGTTTACGGTTTTTCAAACAGCGGATGTGGATGTTTTGCTCACGGAGATTTCC
CGCATTAATCCTGCTGAACTCCTGTTAACTCCAGAACTTATTAAAAGGACTAAACTTTGGGTAGGGTACTATTGTACCGT
ACGGGACCGCAAGACTTTTGACGGTAATGCCATTCCGGAACATTTCCCGGGTCAAGAGAGTTTATTTCGCGAATTTCCCG
CAGCCACCCGTGCTGCAACGGGGCTCTGGACCTATTTATTAGAAACCATGCCCGGCGTTGATCCGACTCATATCGTGGAA
ATCAAAACCTACCGAACGGAACGCTGGATGTTTCTCGATCAATGGACACGGCGAAACCTAGAGCTTACGGAATCTCTCCG
TGGGGTCGGGAAAAAAGGCACGTTGCTTTCCGTCCTCGACTTAACCAAAACGGCCTTTGGGGGCAGACTTTTAAGACATT
GGATTGATAAGCCCTTGCTTTTGCAAGATGAAATAGAAGGCCGCTTGGACTCTATCCAAGAATTAATTTCCGACTCATTC
CTGCGCAAGGATTTGCTGAAGCTTCTATCGGAAGTCTACGACCTGGAGCGCTTAATGGGTAAAGTATCCTATGGTACAGC
TAACGCTAAAGATTTGTTATCCCTGACTCAAACCCTGGCCCTGCTCCCTGATTTATGCTCACTTCTCAGTTCCAGTAGGG
CAGAAACTTTGAAAACCAAGGTTCCTATGCTTGGCGGACTGGAGACCTTTGTGGCCAAGCTGAAAAACGCTATTAATCCG
GCTCCGCCCATTTCTCTAAGGGACGGCAATATTATTAAAACCGGCTACTCCCGGGAAGTCGACCAGCTGCGGGAGATTGC
CAGCGGCGGCAAGGAATGGTTAGCTCAACTGGAGAATGCTGAACGAGAACGAACCGGCATCCGCTCCTTAAAGATCGGCT
ATAATAAAATCTTCGGATATTACATAGAAGTCACTCATGCCAACGCCCATCTTATCCCTAAGGAGTACCAGCGCAAACAA
ACCCTTGCCAATGCTGAGCGTTTTATTACTCCGGAGCTCAAGGACTACGAACTTAAAATAGTTGGTGCAGAGGAAAAACT
TAAAGATCTTGAATATGAGTTGTTCTTAGCCCTTCGAGAAGAGGTTCGCCTGCAAACGAAACGAATTATCCAGGTCGCCC
AGATTCTGGCAGAGATTGACGTCTTTGTCAGCCTGTCTGAAGTTGCTGTGCGCAACCATTATGTACGGCCTCAGATCAAA
AATGATGGTGAAATATTGATCACCGAAGGCCGGCATCCTGTTGTGGAAGAAATGCTTGAGCAAAACCTCTTTGTTCCCAA
CGATACCCATTTATCCGAAAGCCAGCATTTAGCCCTCATTACCGGGCCAAACATGGCTGGAAAATCAACCTATATGCGTC
AAGTCGCTTTGATTGTTCTGATGGCTCACATAGGCTCCTTTGTCCCTGCTAAAAATGCCGGTATTTCCCTGGTGGATCGT
ATTTTCACCCGGGTTGGCGCTTCCGATGATCTGGCGGCAGGGCAGAGTACCTTTATGGTTGAGATGCAGGAAGTCGCTCA
TATTTTGAAATATGCCAGCCCCAAGAGTTTGATTATCTTAGATGAAATCGGAAGGGGGACAGCAACTTATGATGGACTTA
GCATAGCTTGGGCGGTAACTGAGCACTTAGTTAAACATCCTGAGTTCAGACCCAAAACCCTCTTTGCTACACACTATCAT
GAGCTAACCCAGCTTCAAGACGAATTTGCCGGGTTGTTCAATTTACATGTCGGGGTCAAAGAGCGTGGTGAGGACATCGT
CTTCCTGCACAAAATTTTACCTGGCCGGGCAGACCGCAGTTACGGCATTCAAGTAGCTCGTTTAGCTGGTCTTCCCCCGG
AATTGCTGCAGAGGGCTAAAACCTTATTGTTAGAATTAGAGTCGGCTGAACCCGCTCATGCGGTACCGGCTCCCCCTGCC
AAGGTTACTCAGTTTTCCTTATTTGATGAACCGCAAATGCACCCGCTGCTGCAGGAAATCGAATTGCTGCCCTTAGATGA
CATGACGGCCCGTCAAGCTTTGCAATATCTCTTTGATTTACAGGAAAGAATCCAAGCGACGAAAACTATGTAA

Protein sequence :
MTTPMMQQYHLIKEKVPDAILFFRLGDFYEMFGEDAEVAAPILQIALTGRDAGEGKRIPMCGVPYHAVDNYLSKLVKSGH
KVAICEQVEDAKASKGIVKRDIIRIVSPGTLTEAVAERSNHYLASIYFADHWGLAFLDLSTGEFTVFQTADVDVLLTEIS
RINPAELLLTPELIKRTKLWVGYYCTVRDRKTFDGNAIPEHFPGQESLFREFPAATRAATGLWTYLLETMPGVDPTHIVE
IKTYRTERWMFLDQWTRRNLELTESLRGVGKKGTLLSVLDLTKTAFGGRLLRHWIDKPLLLQDEIEGRLDSIQELISDSF
LRKDLLKLLSEVYDLERLMGKVSYGTANAKDLLSLTQTLALLPDLCSLLSSSRAETLKTKVPMLGGLETFVAKLKNAINP
APPISLRDGNIIKTGYSREVDQLREIASGGKEWLAQLENAERERTGIRSLKIGYNKIFGYYIEVTHANAHLIPKEYQRKQ
TLANAERFITPELKDYELKIVGAEEKLKDLEYELFLALREEVRLQTKRIIQVAQILAEIDVFVSLSEVAVRNHYVRPQIK
NDGEILITEGRHPVVEEMLEQNLFVPNDTHLSESQHLALITGPNMAGKSTYMRQVALIVLMAHIGSFVPAKNAGISLVDR
IFTRVGASDDLAAGQSTFMVEMQEVAHILKYASPKSLIILDEIGRGTATYDGLSIAWAVTEHLVKHPEFRPKTLFATHYH
ELTQLQDEFAGLFNLHVGVKERGEDIVFLHKILPGRADRSYGIQVARLAGLPPELLQRAKTLLLELESAEPAHAVPAPPA
KVTQFSLFDEPQMHPLLQEIELLPLDDMTARQALQYLFDLQERIQATKTM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 1e-131 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desor_3208 YP_004971227.1 DNA mismatch repair protein MutS VFG0562 Protein 1e-140 42