Gene Information

Name : Desor_0234 (Desor_0234)
Accession : YP_004968465.1
Strain : Desulfosporosinus orientis DSM 765
Genome accession: NC_016584
Putative virulence/resistance : Unknown
Product : transcription termination/antitermination factor NusG
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 221920 - 222447 bp
Length : 528 bp
Strand : +
Note : PFAM: Transcription termination factor nusG; KOW motif; TIGRFAM: transcription termination/antitermination factor NusG

DNA sequence :
ATGGCAAAAGATTGGTTTGTGATTCATACCTATTCTGGCTATGAGAACAAAGTGAAGATGAACCTCGAAAAACGCGTTGA
ATCAATGAATATGGAAGAAAAGATTTTTCGAGTGCTTGTTCCCATGGAAGATGAAGTTGAGTTCAAAAATGGAAAACAAA
AGATTACCAAACGCAAAGTATATCCGGGTTATGTGCTTGTCGAGATGGAAATGACGGACGACTCGTGGTATGTTGTTCGC
AATACTCCAGGTGTAACCGGATTCGTTGGGTCTGGAACGAAGCCTATTCCTTTGCTTGAAAGTGAAGTAGTGACAATTCT
GCAACAAATGGGAATGGATGAGATTCAAACGCGGGTTGACTTTGAGATTAATCAAAGTGTCCAGGTGATTGCTGGTCCAT
TTAAAGATTTTGTTGGCGTGGTTCGAGAAATTCTTGCCGATAAAGGCAAATTGCGGGTTGAAGTATCCATGTTTGGGAGA
GAGACACCCGTTGAACTTGAGTTCACACAGGTTCAAAAATTAGACTAA

Protein sequence :
MAKDWFVIHTYSGYENKVKMNLEKRVESMNMEEKIFRVLVPMEDEVEFKNGKQKITKRKVYPGYVLVEMEMTDDSWYVVR
NTPGVTGFVGSGTKPIPLLESEVVTILQQMGMDEIQTRVDFEINQSVQVIAGPFKDFVGVVREILADKGKLRVEVSMFGR
ETPVELEFTQVQKLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
nusG YP_006310753.1 transcription antitermination protein NusG Not tested FWisland_4 Protein 1e-34 49
nusG YP_281502.1 transcription antitermination protein NusG Not tested Not named Protein 5e-30 47
BJAB07104_00341 YP_008207806.1 Transcription antiterminator Not tested AbaR25 Protein 1e-35 44
BJAB0868_00345 YP_008211671.1 Transcription antiterminator Not tested AbaR26 Protein 1e-35 44