Gene Information

Name : Desor_2309 (Desor_2309)
Accession : YP_004970417.1
Strain : Desulfosporosinus orientis DSM 765
Genome accession: NC_016584
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2406588 - 2407268 bp
Length : 681 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; TIGRFAM: heavy metal response regulator

DNA sequence :
ATGCGCATTCTAATCGTAGAAGACGAAAAACGAATTGCCTCATTTATAAAGCGGGGCTTGGAAGAAGAGGCTCACGCAGT
TGATGTGGCTTATGATGGTGAAGAAGGTCTTAATTGGATAACAAGCTTCAATTATGATCTCATAATTATGGACATTCTCA
TGCCTAAAATGGATGGCATAACACTTTGCAGGACCATTAGGGAACAAGATATCGATACTCCTGTCTTAATGCTGACAGCC
AAGGATGCAGTTGATGACAGAGTTGAGGGATTGGATGCCGGAGCAGATGATTACCTTGTGAAACCTTTTGCCTTTAAAGA
GCTGCTTGCCAGAATCAGGGCCCTATCGAGGCGGTGGACAGATGGTAAAGGGAATACATTGGAGATTGGAGGCTTAAAAT
TAGACTTGGTCACCCGTAGAACAGTTCGAGGCGGGAAGGAAATAGAACTGACCAACCGTGAGTTTGCTCTTTTAGAACTG
CTCATGCGAAATACCGGTCATGTCCTCAGCCGGACCATCATTGCGGAGCATATCTGGGATTACAATTTTTTAAACCAGTC
CAATGTGGTTGATGTATATATCCGGCAGCTTCGCAGAAAAATAGACGAATCCTTTGAGGAGAAGTTGATTCAGACTGTTC
GGGGTTCAGGTTATAAAATTCAGGGTGGTACTAACAAATGA

Protein sequence :
MRILIVEDEKRIASFIKRGLEEEAHAVDVAYDGEEGLNWITSFNYDLIIMDILMPKMDGITLCRTIREQDIDTPVLMLTA
KDAVDDRVEGLDAGADDYLVKPFAFKELLARIRALSRRWTDGKGNTLEIGGLKLDLVTRRTVRGGKEIELTNREFALLEL
LMRNTGHVLSRTIIAEHIWDYNFLNQSNVVDVYIRQLRRKIDESFEEKLIQTVRGSGYKIQGGTNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-44 47
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 8e-44 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desor_2309 YP_004970417.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0125 Protein 3e-52 52
Desor_2309 YP_004970417.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0083 Protein 1e-50 51
Desor_2309 YP_004970417.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0197 Protein 3e-45 50
Desor_2309 YP_004970417.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0638 Protein 1e-44 48
Desor_2309 YP_004970417.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0308 Protein 6e-49 48
Desor_2309 YP_004970417.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794948.p0 Protein 1e-44 47
Desor_2309 YP_004970417.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003417.p0 Protein 1e-44 47
Desor_2309 YP_004970417.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614146.p0 Protein 1e-44 47
Desor_2309 YP_004970417.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3238224.p0 Protein 1e-44 47
Desor_2309 YP_004970417.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914065.p0 Protein 1e-44 47
Desor_2309 YP_004970417.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121390.p0 Protein 1e-44 47
Desor_2309 YP_004970417.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_010079.5776364.p0 Protein 1e-44 47
Desor_2309 YP_004970417.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859858.p0 Protein 1e-44 47
Desor_2309 YP_004970417.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE015929.1.gene1106. Protein 4e-37 47
Desor_2309 YP_004970417.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0111 Protein 5e-50 47
Desor_2309 YP_004970417.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene1528. Protein 8e-36 46
Desor_2309 YP_004970417.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0347 Protein 2e-44 45
Desor_2309 YP_004970417.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AF155139.2.orf0.gene Protein 7e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desor_2309 YP_004970417.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG0596 Protein 7e-45 47
Desor_2309 YP_004970417.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1390 Protein 1e-46 45
Desor_2309 YP_004970417.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1389 Protein 6e-40 44