Gene Information

Name : Desor_1933 (Desor_1933)
Accession : YP_004970071.1
Strain : Desulfosporosinus orientis DSM 765
Genome accession: NC_016584
Putative virulence/resistance : Unknown
Product : type I restriction system adenine methylase HsdM
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2045325 - 2046920 bp
Length : 1596 bp
Strand : +
Note : PFAM: N-6 DNA Methylase; HsdM N-terminal domain; TIGRFAM: type I restriction system adenine methylase (hsdM)

DNA sequence :
ATGAGTAACTTACAAACCATTACAGCAAAGCTGTGGGCGATGGCCAATGAGCTTCGTGGAAACATGGACGCTTCAGAATA
TAAGAATTACATTTTGGCCTTTATGTTTTATCGTTATCTGTCCGAGCATCAAGAACAGTATTTAGTTGAAAATAATGTTC
TTGATGTTGCTGTTGGCGAATCGGTCAATAAAGCTTACTTAGAACAAGCAAACGGTGACGATTTGAATGACTACTTAGAA
GATATTTCTTCAAGTTTAGGCTATGCCATTGCCCCCCTTGATACCTGGGAATCTTTAGTTCAGAAAATTGATAACAGCAT
GGTGGTTCCAAGTGATTATCAAACGATTTTTGATAACTTCAATAAGAACGCCGAATTAAACAGAGAAGCCGTAAAAGATT
TCCGTGGTGTGTTTAACGACATCAACCTGGGCGACTCACGCCTTGGTTCGTCTACCAATGAACGGGCGAAATCACTGAAC
CGTATTGTCAAGCTGGTTGATGGGATCGATTACAAAGGTGAAGATGGCAAAGATATTCTGGGCGTAATCTATGAATATCT
AATCGGTCAATTTGCGGCAAGTGCAGGCAAAAAAGGCGGGGAGTTCTACACACCTCATGAAGTTTCTAAGATTTTGGCTA
AAGTCGTAACGGATGGGTTAGAAGAATCGGATTATACTTTTTCGGTGTATGACCCGACTTGTGGTTCCGGGTCATTGCTG
TTAACCGTTAAAAGTGAGTTGCCTGGCGGCGATAAACCGGGAGCGATTAAATTCTTTGGTCAGGAAAAGAATACGACAAC
CTACAACCTGGCTCGAATGAACCTGATGATGCATGGCGTTTCCTTTAACAACATGACTCTGTCTAATGCTGACACCCTTG
AAAGGGATTGGCCCGACGGGCCGGACGCCAAAGGAATTGACCACCCGCGCTCTTTTGATGCTGTGGTTGCCAATCCTCCT
TATTCTGCTCATTGGGACAATAGCGAAACGAAACTAAAAGATCCCCGTTTTCGAGACTATGGTAAGCTCGCTCCGAAAAC
TAAGGCAGATTATGCATTCATTTTACACAGTTTGTATCACCTGAATGATACGGGAACAATGGCGATTGTACTGCCTCACG
GTGTCTTGTTCCGTGGTGCGGCAGAAGGAGCGATTCGTCGAACTATAATTGAGAAGAACTACCTTGATACAGTTATAGGG
TTACCTGCCAACTTGTTTTACGGTGTAGGAATTCCAACGACGATTTTAGTATTTAAGAAAAATCGTAAAGCAAAAGATAT
TTTCTTTATCGATGCAAGCAACGAATTTGAAAAAGGTAAGAATCAAAATAGACTTACTGATAAAAACATCAATAAGATTA
TAGAAACTTACAAAAATCGTGTGGATGTTGATAAATACGCTCACGTGGCATCACTTGAAGAAATCAAAGAAAATGAGTTT
AACTTAAATATTCCTCGCTATGTAGATACGTCTGAAGAAGTGCAAGCCATTGATCTTGATGAAGTGAATAAGCAATTAGA
GCAAGATAAACAAGAAATTGCGGAGCTTGAAGCTAAAATCAATGAACAGTTGAAAATTTTAGGAATTAATGTGTAG

Protein sequence :
MSNLQTITAKLWAMANELRGNMDASEYKNYILAFMFYRYLSEHQEQYLVENNVLDVAVGESVNKAYLEQANGDDLNDYLE
DISSSLGYAIAPLDTWESLVQKIDNSMVVPSDYQTIFDNFNKNAELNREAVKDFRGVFNDINLGDSRLGSSTNERAKSLN
RIVKLVDGIDYKGEDGKDILGVIYEYLIGQFAASAGKKGGEFYTPHEVSKILAKVVTDGLEESDYTFSVYDPTCGSGSLL
LTVKSELPGGDKPGAIKFFGQEKNTTTYNLARMNLMMHGVSFNNMTLSNADTLERDWPDGPDAKGIDHPRSFDAVVANPP
YSAHWDNSETKLKDPRFRDYGKLAPKTKADYAFILHSLYHLNDTGTMAIVLPHGVLFRGAAEGAIRRTIIEKNYLDTVIG
LPANLFYGVGIPTTILVFKKNRKAKDIFFIDASNEFEKGKNQNRLTDKNINKIIETYKNRVDVDKYAHVASLEEIKENEF
NLNIPRYVDTSEEVQAIDLDEVNKQLEQDKQEIAELEAKINEQLKILGINV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0053 YP_300143.1 type I restriction-modification system methyltransferase subunit Not tested SCC15305cap Protein 1e-112 51
hsdM NP_645209.1 type I site-specific deoxyribonuclease LldI chain hsdM Not tested vSa¥á Protein 8e-114 51
SAS0394 YP_042520.1 restriction enzyme modification protein Not tested vSa¥á Protein 7e-114 51
SAMSHR1132_16570 YP_005326167.1 restriction-modification system, M subunit Not tested vSa¥â Protein 6e-114 50
SAR1899 YP_041281.1 type I restriction modification system modification protein Not tested vSa¥â Protein 7e-113 50
hsdM NP_373642.1 type I site-specific deoxyribonuclease LldI subunit HsdM Not tested vSa¥á Protein 2e-113 50
SAR0433 YP_039884.1 type I restriction enzyme modification protein Not tested vSa¥á Protein 6e-114 50
hsdM1 YP_185366.1 type I restriction-modification system, M subunit Not tested vSa¥á Protein 2e-113 50
ORF6 BAC22943.1 - Not tested etd PI Protein 2e-113 50
hsdM YP_001331432.1 type I restriction-modification system, methyltransferase subunit Not tested vSa¥á Protein 2e-113 50
SAS1732 YP_043848.1 type I restriction enzyme modification protein Not tested vSa¥â Protein 6e-114 50
hsdM YP_493119.1 type I restriction-modification system, M subunit Not tested vSa¥á Protein 2e-113 50
hsdM NP_646568.1 hypothetical protein Not tested vSa¥â Protein 6e-114 50
SAMSHR1132_03780 YP_005324900.1 putative type I restriction enzyme modification protein Not tested vSa¥á Protein 1e-113 50
SAV1808 NP_372332.1 type I restriction enzyme EcoR124II M protein Not tested vSa¥â Protein 6e-114 50
SAKOR_00415 YP_008490599.1 Type I restriction-modification system methylation subunit Not tested vSa¥á Protein 1e-113 50
SA1626 NP_374915.1 hypothetical protein Not tested vSa¥â Protein 6e-114 50
hsdM2 YP_186690.1 type I restriction-modification system, M subunit Not tested vSa¥â Protein 1e-113 50
hsdM NP_370955.1 type I site-specific deoxyribonuclease LldI chain Not tested vSa¥á Protein 1e-112 50
hsdM YP_001332734.1 type I restriction-modification system, methyltransferase subunit Not tested vSa¥â Protein 5e-114 50
hsdM YP_494443.1 type I restriction-modification system, M subunit Not tested vSa¥â Protein 5e-114 50
SAKOR_01757 YP_008491945.1 Type I restriction-modification system methylation subunit Not tested vSa¥â Protein 3e-114 50