Gene Information

Name : Desor_1552 (Desor_1552)
Accession : YP_004969718.1
Strain : Desulfosporosinus orientis DSM 765
Genome accession: NC_016584
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1630928 - 1631599 bp
Length : 672 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
ATGGAACCGGTTATAGAAATAGTCGACTTGTGCAAGGTCTATAAGCTGGGAACAGTCGATGTCGAAGTCCTGAAAAACAT
CAATGGGCGCATTGACAAGGGTGAGTTTGTTTCCATCATGGGACCCTCAGGTTCGGGAAAAAGTACTCTTCTCTATTTAA
TAGGCGGCCTGGATAAACCCACTTCCGGGTGCATCAAAGTTAACGGCAAGGATATTTCCGTGATGAAGGATAAAGAGGAA
AGCTCCATGCGCAGAAAGGAAATCGGTTTTGTCTTTCAGTTTTACAATCTCATCCCCAATTTGAGTGTGGAAGAAAACGT
TTTGCTTCCTATTTTATTGGATGGGAAAAAGCTAAAAAGTTATCAAGATAAGCTGAAGGAAATTCTCGATATCGTAGGTC
TCCTGGAACGGAGGAACCATACCCCCAGGGAATTATCTGGCGGTCAGCAGCAGCGGGTTGCCATTGCCAGAGCCTTAATC
AATGAGCCGGATATTATTTTAGCCGATGAACCCATCGGAAATCTGGATTCGAAAACGGGAACTGAAGTTATGGAACTTCT
GAAGACCATTAACAGGGAAAAAGGGCGGACGATTGTCCAAGTGACCCATTCCAGGGAAGCGGCAGATTATGGGCAAAGAA
TGATTAACTTAAAGGATGGGAAGGTATGCTAA

Protein sequence : 
MEPVIEIVDLCKVYKLGTVDVEVLKNINGRIDKGEFVSIMGPSGSGKSTLLYLIGGLDKPTSGCIKVNGKDISVMKDKEE
SSMRRKEIGFVFQFYNLIPNLSVEENVLLPILLDGKKLKSYQDKLKEILDIVGLLERRNHTPRELSGGQQQRVAIARALI
NEPDIILADEPIGNLDSKTGTEVMELLKTINREKGRTIVQVTHSREAADYGQRMINLKDGKVC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-33 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-34 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-34 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-34 44
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 4e-30 43
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 7e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desor_1552 YP_004969718.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 7e-49 52
Desor_1552 YP_004969718.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 9e-46 50
Desor_1552 YP_004969718.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 1e-44 48
Desor_1552 YP_004969718.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 2e-40 45
Desor_1552 YP_004969718.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7685735. Protein 1e-37 42