Gene Information

Name : Desor_1065 (Desor_1065)
Accession : YP_004969254.1
Strain : Desulfosporosinus orientis DSM 765
Genome accession: NC_016584
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1080943 - 1081851 bp
Length : 909 bp
Strand : +
Note : PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerC; tyrosine recombinase XerD

DNA sequence :
ATGGCCTCCGAAGAAAAGCTTCTAAAAAAATACTTGACCTTTTTGCATGTGGAGCGGGGGCTTTCTGATAACACAAGGCA
GGCGTATGCGAGAGATTTGCAGCAGCTCATGAACTACCTTCAGCAACGAGGTACGAATGTGTCCGAATGTGTTGGCAATG
ATTTATTTTTGTTTTTGCTGAAATGCAAAGAGAATGGTAAATCTCCTCGTACAATAGCTCGCTGTAACGCTACCATTCGG
GGTTTCTTTGCCTTTATGCTTGATGAAGGTCTGCGAAAGGATAATCCAAGTACTTATTTAGTAACTCCAAAGCTAAATCA
ACCGCTTCCCAAGGTGTTGTCTGAAGTAACAATGGACAAACTATTGCAGGGGGAGGAAGAAGCAGATCTGGCTCTGAGAA
ATTTAACAATCTTAGAAGTACTATATAGCAGTGGACTGCGGGTTTCTGAGCTCATCAACCTTACAATCTCCGATTTTTCT
CTGGATGTAGGGTATGTGCGCTGCATCGGTAAAGGGAATAAGGAGCGGATTGTGCCTTTAGGTGAAGAATCACTAAACAG
TTTAAAGCGTTATTTGAATGGACCGCGGGAGAGATTGTGCGGCAAACAAAACAACGATCGTTTATTTATCAATGCCCACG
GACGGCCATTGACCAGGCAAGGAGTGACTTACATTCTCAATAAATGGGCAAAGGAGCATCATCTTGAGCAATCCATTTCT
CCTCACATGGTTCGTCACAGTTTTGCAACCCATCTCTTAGACCATGGAGCCGATCTGCGTTCGGTTCAAGAAATGTTAGG
GCATGCAGATATTGCGACCACTCAGATATATACTCATTTAACACGGAAACGATTACTGGATGTTTTTCAAAGAGCACATC
CAAGAGCAGGCGATAAAATTAGGGAGTGA

Protein sequence :
MASEEKLLKKYLTFLHVERGLSDNTRQAYARDLQQLMNYLQQRGTNVSECVGNDLFLFLLKCKENGKSPRTIARCNATIR
GFFAFMLDEGLRKDNPSTYLVTPKLNQPLPKVLSEVTMDKLLQGEEEADLALRNLTILEVLYSSGLRVSELINLTISDFS
LDVGYVRCIGKGNKERIVPLGEESLNSLKRYLNGPRERLCGKQNNDRLFINAHGRPLTRQGVTYILNKWAKEHHLEQSIS
PHMVRHSFATHLLDHGADLRSVQEMLGHADIATTQIYTHLTRKRLLDVFQRAHPRAGDKIRE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 8e-50 41
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 8e-50 41