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Name : Desor_0010 (Desor_0010) Accession : YP_004968289.1 Strain : Desulfosporosinus orientis DSM 765 Genome accession: NC_016584 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 10877 - 12142 bp Length : 1266 bp Strand : + Note : PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase DNA sequence : TTGTTGGATCTCAAATTTGTACGTAATAATCCAGAAGTGGTGAAAGAAGCATTACATAAGCGGCATGTTTCAATTAGTCT TGATCGTTTTTTAAGTCAAGAAGCTGAGAGAAGGAAACTACTTTTTGAAGTTGAGACATTAAAAGCTCGTCGCAATACAG TCTCTGAAGAAGTTGGGCGTCTCAAAAAAAGTGGTCAGAATGCTGAGAGTCTTGTCTTAGAGATGAGAGAAGTTGGTCAA AAAATCAAAGACTTAGAAGAAACAACGGCTAATATAGTGCGAGAAATGGAAAAAGTACTCTATGAGATACCAAACATCCC CCATGAATCTGTACCAATAGGTACTGATGAAAATGACAATATAGAGGTTCGTACATGGGGAATTCCTCGTGTCTTTGATT TTGAGCCTAAAGCTCACTTTGAGTTGGGGGAAAAATTGGACATTTTTGATTTCGTCAGAGCTGCTAAAGTGACCGGTGCT CGTTTTACGTTCTATAAAGGCTTAGGAGCGAAGTTAGAACGGTCGTTGATATCTTTTATGCTTGATCGTCATACTTCTAA GGGGTATACCGAAATACTTCCTCCATACTTAGTTAATCGTGGCTCTATGACGGGAACAGGACAATTGCCAAAATTTGAAG ATGATGCCTTTAAAGTTGTCGGAACAGATTACTTTCTAATTCCAACGGCAGAAGTACCAGTAACTAATTTATATCGTGAC GAAATATTGGATGGGAATCAGTTACCCATGTATCATTGTGCCTATAGCTCATGTTTCCGATCGGAAGCCGGTTCTGCAGG CAGAGATACGAGGGGGCTTATTCGCCAACACCAATTCAATAAAGTTGAACTCGTTAAGTTCTCACTTCCTGAAAACTCCT ATGACGAACTGGAAAAGCTGACTAATGACGCTGAGAGTATTCTTCAAGAATTAGAGCTTCCCTATCGTGTTGTGGCTTTG TCAACTGGAGATCTTGGATTTTCTTCAGCAAAAACTTATGATTTAGAAGTTTGGCTCCCTAGCTTTAATACTTATAGAGA GATTTCTTCTTGCAGCAATTTTGAAGATTTTCAGGCACGTAGAGCAAATATTCGTTTTCGCAGAAGTTTAAAGGAAAAGC CGGAATTTGTTCACACTTTAAACGGCAGTGGTTTAGCTATTGGACGCACTGTTGCAGCCATTATGGAAAATTATCAGGAT AAAGATGGCAGGGTTCATATTCCAAAAGCATTACAGCCATATATGGGTGTTGAATATATTGGGTAA Protein sequence : MLDLKFVRNNPEVVKEALHKRHVSISLDRFLSQEAERRKLLFEVETLKARRNTVSEEVGRLKKSGQNAESLVLEMREVGQ KIKDLEETTANIVREMEKVLYEIPNIPHESVPIGTDENDNIEVRTWGIPRVFDFEPKAHFELGEKLDIFDFVRAAKVTGA RFTFYKGLGAKLERSLISFMLDRHTSKGYTEILPPYLVNRGSMTGTGQLPKFEDDAFKVVGTDYFLIPTAEVPVTNLYRD EILDGNQLPMYHCAYSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFSLPENSYDELEKLTNDAESILQELELPYRVVAL STGDLGFSSAKTYDLEVWLPSFNTYREISSCSNFEDFQARRANIRFRRSLKEKPEFVHTLNGSGLAIGRTVAAIMENYQD KDGRVHIPKALQPYMGVEYIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-123 | 61 |
