Gene Information

Name : SBI_09536 (SBI_09536)
Accession : YP_004967785.1
Strain : Streptomyces bingchenggensis BCW-1
Genome accession: NC_016582
Putative virulence/resistance : Unknown
Product : oligopeptide ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 11342023 - 11343753 bp
Length : 1731 bp
Strand : +
Note : COG4172 ABC-type uncharacterized transport system, duplicated ATPase component

DNA sequence :
ATGACCGCCACCCAGGCCTCCGACGCCCCGGCGGCCGAGCCGATTCTCGAACTCGACGACCTCGGTGTCGTCTTCACCAC
CGAGTCCGCGGAGGTTCCCGCCGTACGGGGGGTGTCCCTGCACGTCCGTCCCGGTGAGACCCTCGCTCTGGTCGGCGAGT
CGGGCTCCGGCAAGTCCACCGTCGCGCTGGCCGCGATGGGGCTGCTGGCCGGAAACGCCCGTGCCACGGGCCGGGCCGTG
ATCGACGGCACCGACATCGTCGGCGCCGACGAGGCAGGGCTCGCCGCGCTGCGCGGCCGGACCGTCTCCATGGTGTTCCA
GGAGCCGGCCACCGCGCTCGACCCGCTCACCCGGATCGGCAAGCAGATCGCCGAGGTGATCCGCAACCACAACGACGTCT
CCGCCAAGGACGCCGCCGCTCGCGCCGTCGGACTGCTGCGCAGGGTCGGCATCCCCGAGCCGGAGAAACGCGCGGCCGCC
TACCCCTTCCAGCTCTCCGGGGGCCAGCGCCAGCGGGTGGTCATCGCCATGGCCATCGCAAACGACCCGGCCCTCCTGAT
CGCCGATGAGCCGACCACCGCGCTGGACGTCACCGTGCAGGCCGAGATCCTCGACCTGCTGCGCAGGCTCGCCGCCGAGA
CCGGCACCGGCGTCCTGCTCGTCACCCACAACATGGGTGTGGTCGCCGACTTCGCGGACCGGGTCGCCGTGATGTACCAG
GGCCGGATCGTGGAGACCGGCCCGGTCGAGGACGTACTGCTGCGCCCGTCCCACGACTACACCCGGCGGCTGCTGGCCGC
CGTGCCCCGGCTGTCGGTCGCGGAGTCCGACGAACGCCCGACGGCCGGCGAGGTCCGCCCGGACGACGGGTCCGGCAGCG
GCGACGCCACCGCGCCGGTCGTCGAACTCCGCGACATCTCGGTGGTGTTCGGTCGCGGAAAGCGCTCGGTGCACGCCCTG
GACGGTATCTCGCTCGTCGTCAGCCCCGGCGAGACCCTGGGCCTGGTGGGCGAGTCGGGCTCCGGCAAGTCCACCGCGGC
CCGGGTCGCACTCGGCCTGATCCCGCCGACGTCCGGCGCCGTGTCGCTGTTCGGTGCCGACCTGGCCCGTACCCGTTCCC
GTGCCCGCCGGAGGCTGCGGTCCGGCATAGGCGTGGTCCTCCAGGACCCGGTCGCCTCGCTCGACGCCAGGATGACGGTC
GGCGAGTGCGTCGCCGAGCCGCTGCGGGTGCATCGCCGTGAACTGTCCGCCCGGGACCAGCGCAGCAGGGTTGAAGCAGT
GCTCGACCGGGTCCGGCTGCCCCGCGACATCGTCCGGCGCGCCCCCGGCGAGCTGTCCGGCGGTCAGCGCCAGCGGGTCA
GTCTGGCCCGCGCGCTGGTGCTCGAGCCCCGGCTGCTGGTCGCCGACGAGCCCACCAGCGCGCTCGACGTGAGCGTGCAG
GAGTCCGTACTGAAGGTCATCACGGAACTGCAGGACGAGCTGGGCTTCGCCTGCCTGTTCGTCTCCCACGACCTCGCCGT
CGTCCAGCACTTCGCCCGCCGGGTCGCCGTCATGCGGGCCGGGCGGATCGAGGAGCAGGGCCCCACCGGTGAGACGCTGC
TGCACCCGGAAACCGACTACACCCGGCGGCTGCTGGCCGCCGTGCCGGTCCCCGACCCGGTGGTCCAACGCGGCCGCAGG
GCCGAACGCCTGGCCACCTTGGCGGCCGGACGCATGGAGGCCGAGGCGTGA

Protein sequence :
MTATQASDAPAAEPILELDDLGVVFTTESAEVPAVRGVSLHVRPGETLALVGESGSGKSTVALAAMGLLAGNARATGRAV
IDGTDIVGADEAGLAALRGRTVSMVFQEPATALDPLTRIGKQIAEVIRNHNDVSAKDAAARAVGLLRRVGIPEPEKRAAA
YPFQLSGGQRQRVVIAMAIANDPALLIADEPTTALDVTVQAEILDLLRRLAAETGTGVLLVTHNMGVVADFADRVAVMYQ
GRIVETGPVEDVLLRPSHDYTRRLLAAVPRLSVAESDERPTAGEVRPDDGSGSGDATAPVVELRDISVVFGRGKRSVHAL
DGISLVVSPGETLGLVGESGSGKSTAARVALGLIPPTSGAVSLFGADLARTRSRARRRLRSGIGVVLQDPVASLDARMTV
GECVAEPLRVHRRELSARDQRSRVEAVLDRVRLPRDIVRRAPGELSGGQRQRVSLARALVLEPRLLVADEPTSALDVSVQ
ESVLKVITELQDELGFACLFVSHDLAVVQHFARRVAVMRAGRIEEQGPTGETLLHPETDYTRRLLAAVPVPDPVVQRGRR
AERLATLAAGRMEAEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 5e-73 44
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 5e-73 44
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 5e-73 44
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 5e-73 44
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 4e-95 44