Gene Information

Name : SBI_09270 (SBI_09270)
Accession : YP_004967519.1
Strain : Streptomyces bingchenggensis BCW-1
Genome accession: NC_016582
Putative virulence/resistance : Unknown
Product : potassium-transporting ATPase subunit B
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 11034662 - 11036779 bp
Length : 2118 bp
Strand : +
Note : COG2216 High-affinity K+ transport system, ATPase chain B

DNA sequence :
ATGTCCTCGACCACCGCCGAAGCTACGGCGCACCGGGTCTCGGGCGGTCTGCTCGACCCCCGACAGCTGTTCACCTCCCT
GCCCGACGCGGTCGGAAAGCTCGACCCCCGGACCATGGTCAGGAACCCGGTGATGTTCGTCGTGGAGGTCGGGGCGGTCC
TCACCACCCTCTCGGCCATCAAGAACCCGAGCGTCTTCGCCTGGGTGATCACCGTATGGCTCTGGCTGACCGCGGTCTTC
GCCAACCTGTCCGAGGCCGTGGCCGAGGGCCGCGGCAAGGCCCAGGCGGAGACCCTGCGGCGGACCAAGACCGCCACGGT
CGCCCGCCGGATCGTCGACTGGCGGCCGGGCGCGCGGCCCTCCGGCGAGGCCGACGGCCAGGCGGCCGGTGGTGCGGTGG
GCGAGGAGTCGGTGCCCGCGGCCGAGCTCCGGCTGGGCGACCATGTGGTCGTCGAGGCGGGGCAGATCATCCCGGGCGAC
GGCGATGTCGTCGAGGGTGTGGCCTCGGTCGACGAGTCCGCGATCACGGGCGAGTCGGCCCCGGTCATCCGCGAGTCCGG
GGGCGATCGGTCCGCGGTGACCGGCGGCACCAAGGTGCTGTCCGACCGGATCGTCGTCAAGATCACCTCCAAGCCGGGGG
AGACCTTCATCGACCGGATGATCGCCCTGGTGGAGGGCGCCGCGCGGCAGAAGACACCGAACGAGATCGCGCTGAACATC
CTGCTCGCCTCGCTCACGATCATCTTTCTGCTCGCGGTCGTCACCCTCCAGCCGTTCGCCGTCTACGCGCACGCCGAGCA
GACCATCGTCGTCCTGGTCGCCCTCGTCGTCGCGCTCATCCCGACCACCATCGGCGCCCTGCTGTCCGCGATCGGCATCG
CCGGAATGGACCGGCTCGTCCAGCGCAATGTGCTGGCGATGTCCGGCCGGGCCGTCGAGGCCGCGGGCGATGTCAACACC
CTGCTGCTGGACAAGACCGGCACCATCACCTTCGGCAACCGCCAGGCCGCCGAGTTCCTGCCGGTCGACGGGGTGGGCGT
CGACGACCTCGCGGACGCGGCCCAGCTCTCCTCGCTCGCCGACGAGACCCCCGAGGGCCGCTCGGTGGTCGTCCTCGCCA
AGGAGCGGTACGGACTGCGCGCCCGCGACGAGGGCGAGCTGGCCCGCGCCGCATACCTGCCCTTCACCGCCCAGACCCGG
ATGAGCGGCGTGGACGTCGAAGGCCGACAGGTCCGCAAGGGGGCTGCCGCGGCGGTCACCGCCTGGGTGAACGAGCACGG
GGGGCGGCCCGGCGACGAGGTCCAGGGCGTCGTGGACCGGATCTCCGAATCGGGCGGCACCCCGCTCGTGGTCGCCGAGC
GTACGGAGGGGGCCGCCCGGGTCCTGGGCGTCATCCACCTCAAGGACGTCGTCAAACACGGTATGCGGGAGCGGTTCGAG
GAGCTGCGCCGTATGGGCATCCGCACCGTCATGATCACGGGCGACAACCCGCTGACCGCCCGCGCGATCGCCGACGAGGC
GGGGGTCGACGACTTCCTCGCCGAGGCCACGCCCGAGGACAAGATGGCGCTCATCAGAAGGGAGCAGGCGGGCGGCAAGC
TGGTCGCGATGACCGGCGACGGGACCAACGACGCCCCGGCGCTTGCCCAGGCGGACGTCGGCGTGGCCATGAACACCGGC
ACCTCGGCCGCCAAGGAGGCCGGGAACATGGTGGACCTGGACTCCAACCCGACCAAGCTGATCGAGATCGTCGAGATCGG
CAAACAGCTGCTGATCACGCGTGGCGCGCTGACCACCTTCTCGATCGCCAACGACGTCGCCAAGTACTTCGCGATCATCC
CCGCGATGTTCGCCGCGGTCTACCCCGGCCTGGACAAGCTCAACGTCATGCGGTTGCACAGCCCCACCTCGGCCATCGCC
TCGGCGATCGTCTTCAACGCGCTGATCATCGTCGCGCTGATCCCGCTCGCGCTGCGCGGAGTGCGCTACCGGCCGTCCTC
GGCGGCGTCCCTGCTGAGCCGCAACATCCGGGTCTACGGCCTGGGCGGGCTCGTCCTGCCCTTTCTCGGCATCAAGCTGA
TCGATCTCATCGTCCAGTTCATCCCGGGACTGCGCTGA

Protein sequence :
MSSTTAEATAHRVSGGLLDPRQLFTSLPDAVGKLDPRTMVRNPVMFVVEVGAVLTTLSAIKNPSVFAWVITVWLWLTAVF
ANLSEAVAEGRGKAQAETLRRTKTATVARRIVDWRPGARPSGEADGQAAGGAVGEESVPAAELRLGDHVVVEAGQIIPGD
GDVVEGVASVDESAITGESAPVIRESGGDRSAVTGGTKVLSDRIVVKITSKPGETFIDRMIALVEGAARQKTPNEIALNI
LLASLTIIFLLAVVTLQPFAVYAHAEQTIVVLVALVVALIPTTIGALLSAIGIAGMDRLVQRNVLAMSGRAVEAAGDVNT
LLLDKTGTITFGNRQAAEFLPVDGVGVDDLADAAQLSSLADETPEGRSVVVLAKERYGLRARDEGELARAAYLPFTAQTR
MSGVDVEGRQVRKGAAAAVTAWVNEHGGRPGDEVQGVVDRISESGGTPLVVAERTEGAARVLGVIHLKDVVKHGMRERFE
ELRRMGIRTVMITGDNPLTARAIADEAGVDDFLAEATPEDKMALIRREQAGGKLVAMTGDGTNDAPALAQADVGVAMNTG
TSAAKEAGNMVDLDSNPTKLIEIVEIGKQLLITRGALTTFSIANDVAKYFAIIPAMFAAVYPGLDKLNVMRLHSPTSAIA
SAIVFNALIIVALIPLALRGVRYRPSSAASLLSRNIRVYGLGGLVLPFLGIKLIDLIVQFIPGLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-151 58
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-151 58
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-151 58
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-151 58
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 8e-153 58
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 8e-152 58
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 1e-162 58
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 1e-162 58