Gene Information

Name : SBI_07380 (SBI_07380)
Accession : YP_004965631.1
Strain : Streptomyces bingchenggensis BCW-1
Genome accession: NC_016582
Putative virulence/resistance : Virulence
Product : putative two-component system response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 8794857 - 8795543 bp
Length : 687 bp
Strand : -
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence :
ATGCGACTGCTCATCGTAGAGGACGAGAAACGCCTCGCCACCGCCCTGGCCCGGGGTCTGGCCGCCGAGGGTTTCGCCGT
GGACGTGGCCCACGACGGTGTCAGCGGTCTGCACATGGCGCAGGAGCAGGACTACGACCTGATCGTGCTGGACATCATGC
TGCCCGGCCTGAACGGCTACCGCGTCTGCGCCCAACTGCGGGCGGTCGGCGACGAGACGCCGATCCTCATGCTGACCGCG
AAGGACGGCGAGTACGACGAGGCCGAGGGCCTGGACACAGGCGCGGACGACTACCTCACCAAACCGTTCTCGTACGTCGT
CCTGCAGGCCCGCATCCGCGCCCTGCTGCGTCGCCGTACCCGTGCCGGCGTCCAGGTGCTGAAGATCGGCGACCTGACCG
TCGACCCCGGCGCCAGGCGCGTGGAGCGGGCGGGGGCGGAAGTCACGCTGACCGCGAAAGAGTTCGCGGTCCTGGAGCAG
CTCGCGCTGCACGCGGGCCGGGTCGTGTCGAAGGCGGACGTCCTCGCCCACGTGTGGGACTTCGCCTACGACGGCGACCC
GAACATCGTCGAGGTCTATGTGAGCGCCCTGCGCCGCAAGCTCGACCTCCCGTTCGGACGGCGTTCCATCACGACCGTGC
GAGGCGCCGGATACCGCCTCGAAGCCGACGGCGGCCGCCATGCGTAG

Protein sequence :
MRLLIVEDEKRLATALARGLAAEGFAVDVAHDGVSGLHMAQEQDYDLIVLDIMLPGLNGYRVCAQLRAVGDETPILMLTA
KDGEYDEAEGLDTGADDYLTKPFSYVVLQARIRALLRRRTRAGVQVLKIGDLTVDPGARRVERAGAEVTLTAKEFAVLEQ
LALHAGRVVSKADVLAHVWDFAYDGDPNIVEVYVSALRRKLDLPFGRRSITTVRGAGYRLEADGGRHA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-35 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SBI_07380 YP_004965631.1 putative two-component system response regulator BAC0125 Protein 3e-38 47
SBI_07380 YP_004965631.1 putative two-component system response regulator BAC0083 Protein 1e-34 47
SBI_07380 YP_004965631.1 putative two-component system response regulator BAC0638 Protein 2e-29 47
SBI_07380 YP_004965631.1 putative two-component system response regulator BAC0111 Protein 4e-37 46
SBI_07380 YP_004965631.1 putative two-component system response regulator BAC0308 Protein 3e-34 46
SBI_07380 YP_004965631.1 putative two-component system response regulator U82965.2.orf14.gene. Protein 6e-22 46
SBI_07380 YP_004965631.1 putative two-component system response regulator Y16952.3.orf35.gene. Protein 4e-22 45
SBI_07380 YP_004965631.1 putative two-component system response regulator BAC0197 Protein 6e-36 45
SBI_07380 YP_004965631.1 putative two-component system response regulator AE000516.2.gene3505. Protein 2e-28 42
SBI_07380 YP_004965631.1 putative two-component system response regulator BAC0347 Protein 5e-31 41
SBI_07380 YP_004965631.1 putative two-component system response regulator AE015929.1.gene1106. Protein 1e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SBI_07380 YP_004965631.1 putative two-component system response regulator VFG1390 Protein 4e-38 42