Gene Information

Name : SBI_07331 (SBI_07331)
Accession : YP_004965582.1
Strain : Streptomyces bingchenggensis BCW-1
Genome accession: NC_016582
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator, winged helix family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 8741278 - 8741955 bp
Length : 678 bp
Strand : -
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence :
GTGCGCATTCTCGTGGTGGAAGACGACGCCCGGCTCCGCGAACTCCTCAAGGAAGGCCTGGAGCAGGAGGGTTTCACCGT
CGAGACGGCCGGCGACGGGCGCGATGGCCTGGCGCTCGCTCGGGGCACCGAGTACGCGGCGATCGTGCTGGATGTGATGC
TGCCCGGCCTGTCCGGCTATCAGGTCTGCTCCCGGCTGCGGGAGGCCGGAGTCTGGACGCCGATCCTGATGCTGACCGCC
AAGGACGGCGAGTACGACGAGGCCGACGGACTCGACGTCGGCGCGGACGACTACCTGACCAAGCCGTTCTCCTACGTCGT
GCTGATCGCGCGGGTGCGGGCCCTGGTGCGGCGCGGCGGCCTGGACCGGCCCGAGGTGCTGGAGCTGGGTGATCTGCGGC
TGGAGCCGACGGCCCTGGCCTGTAGCCGAGGGAACGAGGGCATCACGCTCACGGCCAAGGAGTTCGCCGTACTGGAGTGT
CTGGCCAGGCGCGCCGGACAGGTGGTCTCCAAGACCGAGATCGTGCACACCGTGTGGGACACCGCCTACGAGGGCGGGGC
CAATCTCGTCGAGGTCTACATCAGAACCCTGCGCCGGAAGATCGACGTGCCGTACGGCAGGCAGGCGATCCGCACGATAC
GGGGCGCGGGATATCTGCTGGCCCGCGACGGGGGGTGA

Protein sequence :
MRILVVEDDARLRELLKEGLEQEGFTVETAGDGRDGLALARGTEYAAIVLDVMLPGLSGYQVCSRLREAGVWTPILMLTA
KDGEYDEADGLDVGADDYLTKPFSYVVLIARVRALVRRGGLDRPEVLELGDLRLEPTALACSRGNEGITLTAKEFAVLEC
LARRAGQVVSKTEIVHTVWDTAYEGGANLVEVYIRTLRRKIDVPYGRQAIRTIRGAGYLLARDGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 5e-35 41
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SBI_07331 YP_004965582.1 two component transcriptional regulator, winged helix family protein BAC0083 Protein 2e-36 46
SBI_07331 YP_004965582.1 two component transcriptional regulator, winged helix family protein BAC0197 Protein 1e-36 46
SBI_07331 YP_004965582.1 two component transcriptional regulator, winged helix family protein BAC0125 Protein 2e-38 44
SBI_07331 YP_004965582.1 two component transcriptional regulator, winged helix family protein BAC0308 Protein 3e-35 43
SBI_07331 YP_004965582.1 two component transcriptional regulator, winged helix family protein U82965.2.orf14.gene. Protein 5e-26 43
SBI_07331 YP_004965582.1 two component transcriptional regulator, winged helix family protein Y16952.3.orf35.gene. Protein 1e-26 42
SBI_07331 YP_004965582.1 two component transcriptional regulator, winged helix family protein HE999704.1.gene2815. Protein 3e-31 42
SBI_07331 YP_004965582.1 two component transcriptional regulator, winged helix family protein BAC0638 Protein 1e-29 42
SBI_07331 YP_004965582.1 two component transcriptional regulator, winged helix family protein AE000516.2.gene3505. Protein 7e-30 42
SBI_07331 YP_004965582.1 two component transcriptional regulator, winged helix family protein BAC0347 Protein 1e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SBI_07331 YP_004965582.1 two component transcriptional regulator, winged helix family protein VFG1390 Protein 1e-32 43
SBI_07331 YP_004965582.1 two component transcriptional regulator, winged helix family protein VFG0596 Protein 2e-35 41
SBI_07331 YP_004965582.1 two component transcriptional regulator, winged helix family protein VFG1386 Protein 7e-32 41