Gene Information

Name : SBI_05904 (SBI_05904)
Accession : YP_004964155.1
Strain : Streptomyces bingchenggensis BCW-1
Genome accession: NC_016582
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 7182203 - 7182961 bp
Length : 759 bp
Strand : -
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGACACGAACTGACCTGGACACCGCGGCGGTCCGGCTCTCGCGGGTGAGCCGACGCTATGGCTCAGCCCCCGGCACGGA
CGGGGTGACGGCGCTCGACGACGTCAGCCTCTCCTTTCCCGCGGGGAGCTTCACCGCGGTCATGGGCCCCTCCGGCTCCG
GCAAGTCCACGCTTCTGCAGTGCGCGGCGGGCCTGGACCGGCCCGACTCCGGCTCGGTGTCGATCGGCGGCACCCCGCTG
GAGGGGCTGAGCCAGACCCGGCTGACGCGGCTGCGCCGGGAGCGGATCGGCTTCGTCTTCCAGTCCTTCAATCTGCTGCC
CTCGCTGACCGCCGCGCAGAACGTGGCCCTGCCGCTGCGGCTGGCCGGCCGCGCGCCCGCGCGCGCGGAGATACAGGGGG
CGCTGGCCCGGGTGGGGCTGGCGGACCGGGCCGGACACCGGCCCAGTGAGCTGTCCGGCGGCCAGCAGCAGCGCGTGGCG
CTCGCCCGCGCCCTGATCACCCGGCCCCAGGTGCTGTTCGGCGACGAACCGACCGGCGCCCTGGACTCCGCCACCAGCCG
CGATGTCCTGCGGCTGCTCCGGGAGCTGGTCGACGCCGAGCGGCAGACCGTCGTCATGGTCACCCATGACCCGGTGGCCG
CCTCGTATGCCGACCGGGTGGTCTTCCTCGTCGACGGGCGGGTGAGCGGAGAGCTCCAGCAGCCGACCGCCGAGCAGGTG
TCCGCCCGGATGACGCGGCTGGAGACGGTCCCGTGCTGA

Protein sequence : 
MTRTDLDTAAVRLSRVSRRYGSAPGTDGVTALDDVSLSFPAGSFTAVMGPSGSGKSTLLQCAAGLDRPDSGSVSIGGTPL
EGLSQTRLTRLRRERIGFVFQSFNLLPSLTAAQNVALPLRLAGRAPARAEIQGALARVGLADRAGHRPSELSGGQQQRVA
LARALITRPQVLFGDEPTGALDSATSRDVLRLLRELVDAERQTVVMVTHDPVAASYADRVVFLVDGRVSGELQQPTAEQV
SARMTRLETVPC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-33 48
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 48
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 48
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-30 48
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-22 42
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 4e-18 42
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-17 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SBI_05904 YP_004964155.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-30 49
SBI_05904 YP_004964155.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 8e-34 47
SBI_05904 YP_004964155.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-32 45
SBI_05904 YP_004964155.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-34 43