Gene Information

Name : SBI_05586 (SBI_05586)
Accession : YP_004963837.1
Strain : Streptomyces bingchenggensis BCW-1
Genome accession: NC_016582
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6827878 - 6828579 bp
Length : 702 bp
Strand : +
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence :
ATGACCACGCCGGTGATCGAACTGCGGGATGTGAGCCGCGGATACGACGGGGGGCCGCCCGCGCTGGACGACGTGTCGCT
GACCGTGCGGCCCGGGGAGGCCGTCGCGATCCTCGGGCCGTCCGGCAGCGGCAAGTCCACGCTGCTCAATCTGATCGCGG
GCCTGGACCGGCCGGACGCAGGCACCGTCACCGTCGATGGGGTGCGCGTGGACACCCTGGGCGAGGCGGCGTCGGCGCGC
TTCCGGCGCGCGAAGATCGGCATGGTCTTTCAGTTCTTCAATCTGCTCGACGATCTGACCGTCGAGGACAACGTCGCCCT
GCCCGCGCGCATGGCGGGCCGGTCGCGCGGTGCGGCTCACCGGCGCGCGGCCGAACTGCTCCAGTCGCTCGGCGTCGACC
GGCACGCCGACGCCTATCCGGGGCGGTTGTCCGGCGGCGAGCGGCAGCGCGTCGCGGTGGCCCGGGCCCTGGTCAACCGG
CCCGCGCTGCTGCTGGCCGATGAGCCGACCGGCGCGCTGGACACCGCCGCGGGCGAGGCCGTCCGCGATCTGCTCACCGA
GCTCAACGCCGCCGGGCAGACCGTGGTCCTGGTCACCCATGACCTCGCGCTGGCTCAGTCCTGTACGACGCGTACGGTCC
GGCTGGTCGACGGCCGGGTCGCCGCAGAAGGGCACACCGTCATGGCGGAGGAGGCCCGATGA

Protein sequence :
MTTPVIELRDVSRGYDGGPPALDDVSLTVRPGEAVAILGPSGSGKSTLLNLIAGLDRPDAGTVTVDGVRVDTLGEAASAR
FRRAKIGMVFQFFNLLDDLTVEDNVALPARMAGRSRGAAHRRAAELLQSLGVDRHADAYPGRLSGGERQRVAVARALVNR
PALLLADEPTGALDTAAGEAVRDLLTELNAAGQTVVLVTHDLALAQSCTTRTVRLVDGRVAAEGHTVMAEEAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-22 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-23 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-23 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-23 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-23 41
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 6e-14 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SBI_05586 YP_004963837.1 ABC transporter NC_008702.1.4606598. Protein 3e-28 50
SBI_05586 YP_004963837.1 ABC transporter NC_012469.1.7686878. Protein 2e-31 43
SBI_05586 YP_004963837.1 ABC transporter CP001581.1.gene798.p Protein 6e-30 41