Gene Information

Name : SBI_05519 (SBI_05519)
Accession : YP_004963770.1
Strain : Streptomyces bingchenggensis BCW-1
Genome accession: NC_016582
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6753110 - 6753868 bp
Length : 759 bp
Strand : -
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence :
TTGCCCCACCCCGTCCCCCACCCCGTCCCCCACCCCGTAGAACTGCGCGCCGTCTCCCGGCGGTACGGGACGGGGGAGCG
GGCCGTCACCGCCCTCGACCAGGTCACGCTCGACTTCGCCGAGGGCACCATGACCGCCGTGATGGGCCCCTCCGGCTCCG
GCAAGTCCACGCTGCTGCACTGCGCGGCGGGGCTCGACCGGCCGACCGCGGGGCGCGTCGTCATCGGCGGTACGGAGACC
GGGGAGTTGGACGAGACGGCCCTGACCCTGCTGCGCCGGGAGCGGATCGGCTTCGTCTTCCAGTCCTTCAACCTGGTCTC
CGCCCTCACCGCCGAGCAGAACGTCGCCCTCCCGCTGCGCCTCGCGGGCCACCGCCCCGACCCCGCCCAGGTGGCCGCCG
CGCTCGCCGAGGTCGGTCTCGCCGACCGCGCCGGGCACCGCCCGGACCGGCTCTCCGGCGGCCAGCAGCAACGCGTGGCC
ATCGCCCGGGCGCTGATCACCCGGCCCGCGGTGCTCTTCGCCGACGAGCCCACCGGCGCGCTGGACATCACCACCTCGCG
CACCGTGCTCGGCCTGCTGCGCGGTCTGGTCGACCGCCACCGGCAGACGCTGGTCATGGTCACCCACGACCCGGCCGCGG
CCGGGTGGGCCGACCGGGTCGTCTTCCTGGCCGACGGGCGGATCGCCGACGAGATGGCGGACCGGCCCGGGGCGGCGGCC
ATCGCCTCGCGGATGTCGGTGCTGGAGGCGGCGGCATGA

Protein sequence :
MPHPVPHPVPHPVELRAVSRRYGTGERAVTALDQVTLDFAEGTMTAVMGPSGSGKSTLLHCAAGLDRPTAGRVVIGGTET
GELDETALTLLRRERIGFVFQSFNLVSALTAEQNVALPLRLAGHRPDPAQVAAALAEVGLADRAGHRPDRLSGGQQQRVA
IARALITRPAVLFADEPTGALDITTSRTVLGLLRGLVDRHRQTLVMVTHDPAAAGWADRVVFLADGRIADEMADRPGAAA
IASRMSVLEAAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-40 47
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-42 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-42 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-42 45
unnamed ABR13524.1 phosphite import ATP-binding protein Not tested PAGI-7 Protein 5e-21 44
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 6e-26 42
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-22 41
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 3e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SBI_05519 YP_004963770.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-40 51
SBI_05519 YP_004963770.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-44 46
SBI_05519 YP_004963770.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-42 45
SBI_05519 YP_004963770.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 4e-41 44