Gene Information

Name : SBI_05189 (SBI_05189)
Accession : YP_004963440.1
Strain : Streptomyces bingchenggensis BCW-1
Genome accession: NC_016582
Putative virulence/resistance : Resistance
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6392010 - 6392813 bp
Length : 804 bp
Strand : -
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGCGCAGGCAGCGGGGCGGTTCGGGGACGGTGAGCGCGGTGGGGGCGGGGCCGGTGGCCGATGCGCTCACGCTGGAAGG
GGTGAGCAGGGAGTACCGGCGGGGCACCGTCGCGTTGCACCCCGTCGATCTCGCGGTGCCCCGGGGGCGGTTTCTCGCCG
TGATGGGGCCGTCCGGGTCCGGGAAGTCGACCCTGCTGCAGTGCGCCGCCGGGCTCGACCGGCCGACGGCGGGGACGGTG
CGCATCGGGGGTACGGAGCTGGCCTCGCTCAAGGAGGCCGCGCTGACGCGGCTGCGGCGGGAGCGGATCGGGTTCGTCTT
CCAGGCCCACAACCTCGTGCCGTCGCTGAGCGTCGCGGAGAACGTCGCCCTGCCCCTGATGCTCGGCGGCGCGCCGTCCG
ACGGGCGGGCGGCGTGGGCGCTGGAGGCGGTGGGGCTAGCCGAGCGGGGCGCGGACCGGCCGACGGAGCTGTCGGGCGGG
CAGGCCCAGCGGGTGGCGATCGCCCGCGCGCTGGTCACCGAGCCCGACATCGTCTTCGCCGACGAGCCCACCGGCGCGCT
CGACCCGGCCACCGCGCACGGCGTGCTCTCACTGCTGCGGCAGGCCGTCGACCGCGACGGCCACACGGTGGTGATGGTCA
CCCACGACCCGGTCGCGGCCGCCTGGGCGGACGAGGCCCTGTTTCTGGCACGGGGGCGGGCCGCCGGCCGGCTGGACCGG
CCCGGGGCCGACGAAGTGCGCCGCGTGATGCGGGACCTGGGGCGGGACAGGGCGACGATACGTGAGGAGGGGCAGAGGGC
ATGA

Protein sequence : 
MRRQRGGSGTVSAVGAGPVADALTLEGVSREYRRGTVALHPVDLAVPRGRFLAVMGPSGSGKSTLLQCAAGLDRPTAGTV
RIGGTELASLKEAALTRLRRERIGFVFQAHNLVPSLSVAENVALPLMLGGAPSDGRAAWALEAVGLAERGADRPTELSGG
QAQRVAIARALVTEPDIVFADEPTGALDPATAHGVLSLLRQAVDRDGHTVVMVTHDPVAAAWADEALFLARGRAAGRLDR
PGADEVRRVMRDLGRDRATIREEGQRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-36 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-35 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-35 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-35 46
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-29 43
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 6e-22 42
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 5e-22 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SBI_05189 YP_004963440.1 putative ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-38 50
SBI_05189 YP_004963440.1 putative ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-41 47
SBI_05189 YP_004963440.1 putative ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-38 44