Gene Information

Name : SBI_04999 (SBI_04999)
Accession : YP_004963250.1
Strain : Streptomyces bingchenggensis BCW-1
Genome accession: NC_016582
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6183890 - 6184603 bp
Length : 714 bp
Strand : +
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence :
TTGGACGCAGTCAGCAGGGTTTACGGCAAGGGCCAAGGGGCCGTCGCCGCGCTCCGCGAGGTATCGGTGAACATCGCCCA
GGGCACTTTCACGGCGGTGATGGGCCCCTCCGGATCGGGCAAGAGCACCTTCCTGCACTGCGCCGCCGGCCTCGACACCC
CCACCTCCGGCACGGTCCGGCTGGGGGACACGGACCTGACCGGGATGGACGAGACGAAGCTGACCCGACTGCGGCGGCAG
CGGGTCGGGTTCGTCTTCCAGGCGTTCAACCTCATCTCGTCGCTCACCGTGCTGGAGAACATCACCCTGCCACTGCGGCT
GGCCGGGGCCCGCCCGGACAAGGCGTGGCTGGGCGAGATCGTGCGACGCGTGGGACTTGAGGGGCGTACGGACCGCCGCC
CGGCCCAGCTCTCCGGCGGCCAGCAGCAGCGCGTCGCGCTCGCCCGCGCGCTGGCCACCCGCCCCGAGGTGATCTTCGGC
GACGAGCCGACCGGAGCGCTCGACACGATGACCGCCCGCGACGTCCTGACCCTGCTGCGGGAGACCGTCGACGACATGGG
TCAGACGGTGGTCATGGTCACCCACGACCCGGTGGCGGCCTCGTACGCGGACACCGTCCTCTTCCTGGCCGACGGCCGCA
TCGTCGACGTGATGGGCGCCCCGACCTCCGACAAGATCGCCGAGCGGATGACCCGGCTGGGAGCGTGGAACTGA

Protein sequence :
MDAVSRVYGKGQGAVAALREVSVNIAQGTFTAVMGPSGSGKSTFLHCAAGLDTPTSGTVRLGDTDLTGMDETKLTRLRRQ
RVGFVFQAFNLISSLTVLENITLPLRLAGARPDKAWLGEIVRRVGLEGRTDRRPAQLSGGQQQRVALARALATRPEVIFG
DEPTGALDTMTARDVLTLLRETVDDMGQTVVMVTHDPVAASYADTVLFLADGRIVDVMGAPTSDKIAERMTRLGAWN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-36 47
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-38 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-38 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-38 44
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-26 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SBI_04999 YP_004963250.1 ABC transporter CP001581.1.gene598.p Protein 1e-41 47
SBI_04999 YP_004963250.1 ABC transporter NC_008702.1.4606598. Protein 1e-35 47
SBI_04999 YP_004963250.1 ABC transporter CP001581.1.gene798.p Protein 3e-38 46
SBI_04999 YP_004963250.1 ABC transporter NC_012469.1.7686878. Protein 2e-37 43