Gene Information

Name : SBI_04678 (SBI_04678)
Accession : YP_004962929.1
Strain : Streptomyces bingchenggensis BCW-1
Genome accession: NC_016582
Putative virulence/resistance : Resistance
Product : TetR family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5831279 - 5831929 bp
Length : 651 bp
Strand : -
Note : COG1309 Transcriptional regulator

DNA sequence :
ATGGCGACGCGACTGGACCGCACGCAGGTGGTGGACACCGCGCTGCGGCTGCTGAACGAGGTGGGTCTCGAAGGGCTTAC
GCTGCGCCGGATCGCCAAGGAGCTGAACGTCCAGGCGCCCGCCCTCTACTGGCATTTCAAGAACAAGCAGGCCCTCCTCG
ACGAGATGGCCACCGCCATGTACCGCGAGATGGCGGCCGGTGAGGCGGCGGCCCCCGCCGCCACCTGGCAGGAACGCGTG
GCGGACGCCCAGCGGGCGCTGCGCGGCGCGCTTCTGCGCTACCGCGACGGCGCGAAGGTCTTCAGCGGCAGCCATTTCAC
GGACGCCTCACACGCCCCCGGCCAGAACGAGCACCTGCGCGCACTCGTCGCCGCGGGCTTCACCCCCGGCACCGCCGCCC
GCGCCTCCTTCATCGCGTACGCGTTCACCCTCGGGTTCGTGATCGAGGAACAGGCGGTGCAGCCGATGCCCGGCGAGCGG
GCTGAGGGCTACGACGTCCAGGAGCGCGCGAAGCTCATCGGCGAGGAGTACGCGCTGGCGGCAGAGGTGGGCGCGGACCT
GTTCACGGATTACGAGGCGCGCTTCGAGGAGGGGCTGCGCGCCATCGTCGCGGGCATCGAGGCGACCATGGGCCCTGACG
CGCGGTCTTGA

Protein sequence :
MATRLDRTQVVDTALRLLNEVGLEGLTLRRIAKELNVQAPALYWHFKNKQALLDEMATAMYREMAAGEAAAPAATWQERV
ADAQRALRGALLRYRDGAKVFSGSHFTDASHAPGQNEHLRALVAAGFTPGTAARASFIAYAFTLGFVIEEQAVQPMPGER
AEGYDVQERAKLIGEEYALAAEVGADLFTDYEARFEEGLRAIVAGIEATMGPDARS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetR(A) AGK07026.1 TetR(A) Not tested SGI1 Protein 5e-28 41
tetR(A) AGK07084.1 TetR(A) Not tested SGI1 Protein 5e-28 41
tetR YP_006098395.1 tetracycline repressor Not tested Tn2411 Protein 7e-28 41
tetR(A) ACK44536.1 TetR(A) Not tested SGI1 Protein 5e-28 41
tetR CAJ77065.1 Tetracycline repressor protein Not tested AbaR1 Protein 4e-28 41
tetR(A) ACN81010.1 repressor protein Not tested AbaR5 Protein 6e-28 41
tetR1 YP_005176239.1 tetracycline repressor protein Not tested ICEPmu1 Protein 4e-23 41
tetR2 YP_005176247.1 tetracycline repressor protein Not tested ICEPmu1 Protein 4e-23 41