Gene Information

Name : SBI_04485 (SBI_04485)
Accession : YP_004962736.1
Strain : Streptomyces bingchenggensis BCW-1
Genome accession: NC_016582
Putative virulence/resistance : Resistance
Product : ABC transporter nucleotide binding/ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5616293 - 5616994 bp
Length : 702 bp
Strand : +
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
GTGTCCAAGGAGTACGGCGAGCGCCAGAGCCTGGTGCGGGCGGTCGACAACGTCGACATGGCGGTGCGCGCGGGCCACAG
CGTCGCGGTGATGGGCCCCAGCGGTTGCGGCAAGTCCACGCTGCTGCATCTGCTCGGCGGCATGGACCGGCCGACCCGTG
GGGAGATCTGGCTGGCCGGCCACCGCCTGGATGTGCTGGGCGAACGGGCCCTGGCCCGGTTGCGCCGCGCGCATGTGGGC
TTCGTCTTCCAGTCCTTCCATCTGATGGACGAGCTGTCGGCGGTGGAGAGCGTGGAGTTCCCCGCGCTGCTGGCCGGATG
CGGGCGGCGCCGGGCCCGCCGCCGGGCCGTGGAGTTGCTGGAGCAGGTCGGGTTGGGCGACCGGGCGAACCACCTGCCGT
CGGAACTGTCCGGGGGCCAGCGCCAGCGGGTCGCGATCGCGCGGGCGCTCGCCAACGCGCCCTCCCTCATCCTGGCCGAC
GAGCCGACCGGCAATCTGGACAGCGCGGCGACACGTGACGTGCTCCGCCTCTTCGAGAAGCTGCGGGTGGCCGGGCAGAC
GCTGGTCATGGTCACTCACGATCCGCGGACCGCCGCCACCGCCGACCGGTTGATCACCATGCATGACGGAGCCTTCGTCG
ACGACACGGCCCTCTCGCCGGCCCAGGCACCGGCTGCCTCCCTGATCGATCTGGAGGGCTGA

Protein sequence : 
MSKEYGERQSLVRAVDNVDMAVRAGHSVAVMGPSGCGKSTLLHLLGGMDRPTRGEIWLAGHRLDVLGERALARLRRAHVG
FVFQSFHLMDELSAVESVEFPALLAGCGRRRARRRAVELLEQVGLGDRANHLPSELSGGQRQRVAIARALANAPSLILAD
EPTGNLDSAATRDVLRLFEKLRVAGQTLVMVTHDPRTAATADRLITMHDGAFVDDTALSPAQAPAASLIDLEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-29 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-30 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SBI_04485 YP_004962736.1 ABC transporter nucleotide binding/ATPase NC_008702.1.4606598. Protein 8e-34 50
SBI_04485 YP_004962736.1 ABC transporter nucleotide binding/ATPase NC_012469.1.7686878. Protein 8e-43 47
SBI_04485 YP_004962736.1 ABC transporter nucleotide binding/ATPase CP001581.1.gene798.p Protein 4e-36 45
SBI_04485 YP_004962736.1 ABC transporter nucleotide binding/ATPase CP001581.1.gene598.p Protein 6e-32 42