Gene Information

Name : SBI_04481 (SBI_04481)
Accession : YP_004962732.1
Strain : Streptomyces bingchenggensis BCW-1
Genome accession: NC_016582
Putative virulence/resistance : Resistance
Product : ABC transporter nucleotide binding/ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5611823 - 5612560 bp
Length : 738 bp
Strand : +
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence :
GTGCTGCGCGCGGTCGGCCTGGCCCGGGTGTACGGGGAGGACGAGAGCGCGGTGTGGGCCGTCGATGGGGTCGACCTCGA
CGTTCCCACCGGGCAGACGCTCGCCGTGACCGGGCCAAGCGGCTGTGGTAAATCCACGCTGCTCCAGCTTCTCGGCGGAC
TTGACCGGCCTACGGAGGGCGAGGTGTGGCTCGGTGGGCGGCGCGTCGACGACCTCGGCGAGCGGGCGCTGGCCCGGCTG
CGGCGCCGCGCCGTCGGGTTCGTCTTCCAGGCCTACCACCTGATGGACGAGCTGACCGCGGCGGAGAACGTCGAGCTGCC
CGCGCTGCTCGCCGGCGTCTCACCGCGTACCGCCCGCCGCCGTGCCGCCGAACTCCTCGGTCACGTCGGACTCGCCGACC
GGGCCCGGCATCTGCCCTCGGAGCTGTCCGGCGGGCAGCGGCAGCGGGTCGCCATCGCCCGCGCCCTGGTCAACAAGCCG
CTGGTGGTCCTCGCCGACGAGCCCACCGGAAACCTCGACAGCGCCGCGACCCACGACATCCTCCGGCTCTTCGACGAGCT
GCGCGCCGCCGGCCAGACCCTGGTCATGGTCACCCACGACGAACGCGTCGCCGCCACCGCCGACCGCATCGTCTCCCTGC
GCGACGGCGCGCTGGCCGACGACACACCCCTGAACACCTCCCTGGACACCGAAAGCGGCAGCACACGGCTCGGCACGCTC
TTGAGCTGGGAGGACTGA

Protein sequence :
MLRAVGLARVYGEDESAVWAVDGVDLDVPTGQTLAVTGPSGCGKSTLLQLLGGLDRPTEGEVWLGGRRVDDLGERALARL
RRRAVGFVFQAYHLMDELTAAENVELPALLAGVSPRTARRRAAELLGHVGLADRARHLPSELSGGQRQRVAIARALVNKP
LVVLADEPTGNLDSAATHDILRLFDELRAAGQTLVMVTHDERVAATADRIVSLRDGALADDTPLNTSLDTESGSTRLGTL
LSWED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-34 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-36 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-36 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-36 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SBI_04481 YP_004962732.1 ABC transporter nucleotide binding/ATPase NC_008702.1.4606598. Protein 5e-38 50
SBI_04481 YP_004962732.1 ABC transporter nucleotide binding/ATPase NC_012469.1.7686878. Protein 3e-47 48
SBI_04481 YP_004962732.1 ABC transporter nucleotide binding/ATPase CP001581.1.gene798.p Protein 6e-42 44
SBI_04481 YP_004962732.1 ABC transporter nucleotide binding/ATPase CP001581.1.gene598.p Protein 2e-35 42