Gene Information

Name : SBI_04396 (SBI_04396)
Accession : YP_004962647.1
Strain : Streptomyces bingchenggensis BCW-1
Genome accession: NC_016582
Putative virulence/resistance : Unknown
Product : membrane transport protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5522687 - 5524930 bp
Length : 2244 bp
Strand : -
Note : COG2409 Predicted drug exporters of the RND superfamily

DNA sequence :
GTGGCCACGTTCCTCTATAAACTCGGCCGATTCGCCTTCCGGCGACGCCGGTTCGTCGCCCTGATATGGGTGGCGCTCCT
GGCGGTCGCCGGGGTCGGCGCCGCCACCGCCTCGCAACCCACCAACGACAGCTTCTCCATCCCGGGGACGGAGGCCCAGA
AGGCCTTCGACGTGCTGGAACAGCGCTTCCCGGGCGGTAATGCGCAGGGCGCCACCGCGCGCGTGGTCTTCCGCGCACCG
GCCGGCGAGAAGATGACCGACGCGGCCAACAAGGCGACGGTCCAAAAGACCGTCCGCGAGCTCCGGTCGGGCTCGGACGA
GGTCGCCTCGGTCGCCGACCCGTACAAGGCGGGCGGGGTCAGCAAGGACAAGACCACGGCGTACGTTCTGACCTCCTACA
AGGTCAGCGCCATGGAGCTGGAGGACAAGACGCGGGACGCGCTGAAGGAGGCGGGCGAGGACGCCCGCGCCTCGGGGCTG
ACGGTCGAGATCGGCGGTGACGCGCTGGAGCAGATGCCCGAGACCGGCGCCACCGAGATCATCGGCATCGCGATCTCGGC
GGTCGTCCTCCTCATCACCTTCGGCTCGCTGGTCGCCGCCGGACTGCCGCTGCTCACCGCGATCATCGGCGTCGGCATCG
GCATCTCCGGGATCACCGCCCTCGCCACCACCCTGGGCCTGTCCAGTACGACCTCGACGCTGGCGATGATGATCGGCCTC
GCGGTCGGCATCGACTACGCGCTGTTCATCGTCTCCCGCTACCGGGCCGAACTGGCCGAGGGGCAGGAGCGGGAAGAGGC
CGCCGGGCGTGCGGTGGGCACCGCGGGATCCGCGGTGGTCTTCGCCGGGCTCACCGTCGTCATCGCCCTCGCCGGCCTCG
CGGTCGTCAACATCCCGATGCTGTCCAAGATGGGCTTCGCCGCGGCGGGCACGGTGGTCATCGCCGTCCTCATCGCGATC
AGCCTCATCCCGGCCCTGCTGGGCTTCGCGGGCAGCAAGGTGCTCAGCCGGAAGGTCCGCAAGGCCGCCAAGAAGGGCGC
GGAGGGCGAGGCCGCGGGCGAGGAGAAGCCCAACGCGGGTACCCGCTGGGCCCGTTTCGTACTGCGCCGCCCGGTGACGG
TGCTGCTGGTGGGTGTGCTCGGCCTCGGCGCCGCCGCGCTCCCCGCGGCCAGCCTGGAGCTCGGCCTGCCCGACGACGGC
TCGCAGCCGACCAGCACCACCAAGCGCAAGGCGTACGACCTGATGTCCGACGGCTTCGGCCCGGGCTTCAACGGACCGCT
GATGGTGGTCGTCGACGCCAAGGGCAGCGACGATCCCAAGGGCGCTGTGGAGCAGGCCCGCAAGGCCATCCGCGACGTCG
ACGGCGTCGCGAGTGTCAGCCCGGCCCAGTTCAACAAGGCCAATGACACCGCGATGCTGACGGTCATCTCCAAGTACAAG
CCGAGCAGCGTCGACACCGAGGATGTGGTGCACCACATCCGGGACGAGGCCGCGTCCCTCAAGTCCGGGACCGGCGCCGA
GATGCTGGTGACCGGCCAGACGGCGATGAACATCGACATCTCGCAGAAGCTGAACGACGCGCTGCTGCCCTATCTGGGGC
TGGTCGTCGGCCTGGCCTTCCTGCTGCTGATGGTGGTCTTCCGGTCGCTGCTGGTGCCGCTCAAGGCGGCCCTCGGCTTC
CTGCTGTCCGTCGTGGCGGCGCTGGGCGCGGTTGTCGCGGTCTTCCAGTGGGGCTGGGGCGGGAGCCTGTTCAACGTCGA
GGAGCCCGGCCCGATCATGAGCATGATGCCGATCTTCATGATCGGTGTGGTGTTCGGCCTGGCGATGGACTACGAGGTGT
TCCTCGTGACCCGGATGCGCGAGGCGTACGTCCACGGCGAGCGGCCGGGCCAGGCCGTGGTCACGGGCTTCCGGCACGGG
GCCCGGGTGGTCACCGCCGCCGCGGTCATCATGATGAGCGTCTTCGCCGGGTTCATCGGCTCGTCCGAGTCGATGGTGAA
GATGATCGGCTTCGGCCTCGCCATCGCGGTGTTCTTCGACGCGTTCATCGTCCGTATGACCATCGTTCCGGCGGTGCTCG
CGCTGCTCGGGAAGGCCGCGTGGTGGCTGCCGCGCTGGCTGGACAAGGCGCTGCCGAACGTGGACGTGGAGGGCGAGGGG
CTGCGCAAGCAGCTCGCCCCGGACTCCGCGGTGCGTGTGGAGCGGGATGAGTGGGACCCCGATGCGGATCTGACCCGGGT
GTAA

Protein sequence :
MATFLYKLGRFAFRRRRFVALIWVALLAVAGVGAATASQPTNDSFSIPGTEAQKAFDVLEQRFPGGNAQGATARVVFRAP
AGEKMTDAANKATVQKTVRELRSGSDEVASVADPYKAGGVSKDKTTAYVLTSYKVSAMELEDKTRDALKEAGEDARASGL
TVEIGGDALEQMPETGATEIIGIAISAVVLLITFGSLVAAGLPLLTAIIGVGIGISGITALATTLGLSSTTSTLAMMIGL
AVGIDYALFIVSRYRAELAEGQEREEAAGRAVGTAGSAVVFAGLTVVIALAGLAVVNIPMLSKMGFAAAGTVVIAVLIAI
SLIPALLGFAGSKVLSRKVRKAAKKGAEGEAAGEEKPNAGTRWARFVLRRPVTVLLVGVLGLGAAALPAASLELGLPDDG
SQPTSTTKRKAYDLMSDGFGPGFNGPLMVVVDAKGSDDPKGAVEQARKAIRDVDGVASVSPAQFNKANDTAMLTVISKYK
PSSVDTEDVVHHIRDEAASLKSGTGAEMLVTGQTAMNIDISQKLNDALLPYLGLVVGLAFLLLMVVFRSLLVPLKAALGF
LLSVVAALGAVVAVFQWGWGGSLFNVEEPGPIMSMMPIFMIGVVFGLAMDYEVFLVTRMREAYVHGERPGQAVVTGFRHG
ARVVTAAAVIMMSVFAGFIGSSESMVKMIGFGLAIAVFFDAFIVRMTIVPAVLALLGKAAWWLPRWLDKALPNVDVEGEG
LRKQLAPDSAVRVERDEWDPDADLTRV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CMM_0093 YP_001220832.1 RND family transporter Not tested chp/tomA region Protein 3e-67 41