Gene Information

Name : SBI_04338 (SBI_04338)
Accession : YP_004962589.1
Strain : Streptomyces bingchenggensis BCW-1
Genome accession: NC_016582
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5456490 - 5457278 bp
Length : 789 bp
Strand : -
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
GTGACAACCGCTGTATCGATTCCCAAGACCGGGGGCAGTGGAGGACATACGGCTGTTGCCGCCCGTGCGCGCCAGGTCGT
CAAGGCGTACGGCTCCGGCGAGACCCGTGTGGTCGCGCTGGACCATGTGGACGTCGACATTGCCCGCGGGCAGTTCACCG
CGATCATGGGCCCGTCGGGCTCCGGCAAGTCGACCCTCATGCACTGCGTCGCCGGTCTCGACACCGTGACCTCCGGTCAG
ATCTTCATCGACGAGACGGAGATCACGGGGCTCAAGGACAAGAAGCTCACCCAGCTGCGCCGCGACCGGATCGGCTTTAT
CTTCCAGGCGTTCAACCTCCTCCCCACGCTCAACGCGATAGAGAACATCACGCTGCCCATGGACATCGCGGGCCGTAAGC
CGGACCGTGCCTGGCTGGACCAGGTGGTGGAGACGGTGGGTCTGGCCGAGCGGCTCAAGCACCGGCCGAACCAGCTCTCC
GGTGGTCAGCAGCAGCGCGTCGCCGTGGCGCGCGCCCTCGCCGCCCGCCCCGAGATCATCTTCGGTGACGAGCCCACCGG
AAACCTGGACTCCCGGGCCGGCGCCGAGGTGCTGGGCTTCCTGCGGCGCTCGGTGGACGAGCTGGGCCAGACCATCGTGA
TGGTCACCCATGACCCGGTCGCCGCCGCGTACGCCAACCGGGTGCTGTATCTGGCCGACGGCCGGATCGTCGACGAGATG
TACAACCCCACCGCCGAGCTGGTGCTGGAGCGGATGAAGAACTTCGACGCGCGCGGGCGGGTGTCATGA

Protein sequence : 
MTTAVSIPKTGGSGGHTAVAARARQVVKAYGSGETRVVALDHVDVDIARGQFTAIMGPSGSGKSTLMHCVAGLDTVTSGQ
IFIDETEITGLKDKKLTQLRRDRIGFIFQAFNLLPTLNAIENITLPMDIAGRKPDRAWLDQVVETVGLAERLKHRPNQLS
GGQQQRVAVARALAARPEIIFGDEPTGNLDSRAGAEVLGFLRRSVDELGQTIVMVTHDPVAAAYANRVLYLADGRIVDEM
YNPTAELVLERMKNFDARGRVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-35 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-35 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-35 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 8e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SBI_04338 YP_004962589.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-37 48
SBI_04338 YP_004962589.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-41 46
SBI_04338 YP_004962589.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 9e-39 45
SBI_04338 YP_004962589.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-32 42
SBI_04338 YP_004962589.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 9e-29 42