Gene Information

Name : SBI_03827 (SBI_03827)
Accession : YP_004962079.1
Strain : Streptomyces bingchenggensis BCW-1
Genome accession: NC_016582
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4922708 - 4923505 bp
Length : 798 bp
Strand : -
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence :
ATGAACGGGACACAGGACCCGCATGCTCGGCCGGTCGTCCGGCTCGACGCCGTCAGCCGGCTCTACGGCGGACCGAAAAA
CCGAGTGACCGCACTCGACAACGTCAGCATCAGTCTGAAGAGGGGTACTTTCACCGCCGTCATGGGCCCCTCGGGCTCGG
GCAAGTCCACCTTCCTGCACTGCGCCGCAGGCCTCGACCGTCCGACATCGGGTGCGGTGCACCTGGACGGGGTGGACCTC
GGCTTGCTGCGGGAGAAGGCCCTGACCAAGTTCCGCCGCGAGCGCATCGGCTTCGTCTTCCAGGCGTTCAACCTCCTTCC
GGCACTGAGCGTGGTGGACAACGTGACACTGCCGCTGCGGCTGGCGGGCAAACGCCCCAATAAGGCCGTCGTCGACGAAG
TCCTCGAACAGGTCGGCCTGTCCGGCAAGCGGCGCAGCCGTCCCGGTGAGCTCTCCGGCGGTCAGCAGCAGCGCGTCGCC
ATCGCGCGGGCGCTCGTTACCCAGCCCGCGGTGATCTTCGGCGACGAACCGACCGGCGCCCTGGACACGCGCCCCGCCGC
CGAAGTGCTCATGCTGGTACGGCAGTCGGTGGACGTGGTGGGGCAGACCGTAGTGATGGTCACGCACGACCCGGTGGCCG
CCTCGTACGCCGACCGCGTCGTGTTCCTGGCTGACGGCCGGCTCACCGGCGTAGTCGACCGGCCGACTGTCGAGCAGGTG
ACGGAGCAGTTGCAGAAGCTGGGCACCTGGGGCGACCCCTTCGGCATCCAGCGGACCGGACACGAGGTGCGCCGATGA

Protein sequence :
MNGTQDPHARPVVRLDAVSRLYGGPKNRVTALDNVSISLKRGTFTAVMGPSGSGKSTFLHCAAGLDRPTSGAVHLDGVDL
GLLREKALTKFRRERIGFVFQAFNLLPALSVVDNVTLPLRLAGKRPNKAVVDEVLEQVGLSGKRRSRPGELSGGQQQRVA
IARALVTQPAVIFGDEPTGALDTRPAAEVLMLVRQSVDVVGQTVVMVTHDPVAASYADRVVFLADGRLTGVVDRPTVEQV
TEQLQKLGTWGDPFGIQRTGHEVRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-39 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-39 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-39 44
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SBI_03827 YP_004962079.1 ABC transporter CP001581.1.gene598.p Protein 3e-40 45
SBI_03827 YP_004962079.1 ABC transporter CP001581.1.gene798.p Protein 1e-38 45
SBI_03827 YP_004962079.1 ABC transporter NC_008702.1.4606598. Protein 1e-32 45
SBI_03827 YP_004962079.1 ABC transporter NC_012469.1.7686878. Protein 2e-38 44