Gene Information

Name : SBI_03105 (SBI_03105)
Accession : YP_004961357.1
Strain : Streptomyces bingchenggensis BCW-1
Genome accession: NC_016582
Putative virulence/resistance : Virulence
Product : putative iron-siderophore ABC transporter substrate-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4055996 - 4057033 bp
Length : 1038 bp
Strand : +
Note : COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component

DNA sequence :
ATGTCCCCTCGACGCCGCGGTACCGCCGCCGTCGCCCTCGCTGTCGCCGCCGCGCTGTCCCTCGCGGCCTGCGGCGGCTC
CTCCGACGGCGAGAAGGAAGGGAGCGGCGGGCAGGGCGACAAGAAGTCCGTGTCCAAGGACGGCAAGGACTTCGCGAGCG
CGGCCAAGAAGACCGCCGCGATGGGCACGGACGCCAAGGCCGGCCAGTGGCCGCGCACCATCACCCACGCCATGGGCAAG
ACCGAGCTGAAGGCCCAGCCCAAGCGGGTGGTCGTGCTGGACGTCGGCGAGCTCGACAACGTGGTGTCGCTCGGCATCAA
GCCGGTCGGCCTGGCGCCGACCGAGGGCTCCCCGGAGCTCCCGTCGTACCTGAAGAAGGAGGCGGGCAGCCCGAAGAACG
TCGGCACCATCAACAACCTCAACCTCGAGGCGATCGCCGGCCTCAAGCCCGATCTGATCCTCGGCAGCCAGCTGCGCGCC
GCGGACAAGTACGACGAGCTGTCGAAGATAGCCCCGACCGTCTTCTCCATCCGCCCCGGCTTCACCTGGAAGCAGAACTA
CCTCCTCAACGCCGCCGCGCTGGACAAGACGGCCGAGGCCAAGGCGGAACTCGCCGACTACGACAAGAAGGTCAAGGCGC
TGGACACCAAGCTGGGTGCCAAGAAGCCGACCGTCTCCATGGTCCGGTTCATGCCCGACGGTGTGATCCGCCTGTACGCC
AACGCCTCGTTCATCGGCACGATCCTGAAGGACGCGCACATTCCGCGCCCCAAGAACCAGGACGTGGAAGACCTCGCCAC
CGAGATCAGCGCCGAGAACATCGACAAGGCCGACGCCGACTACATCTTCACCGGCGTCTACGGCGACCCGAAGGCCACGG
ACCGCTCCAAGGCGCAGGGCAACCCGCTGTGGAAGAACCTCAAGGCGGTCAAGGCGGGTCACGCCACCGACGTCCCGGAC
GAGACCTGGTACCTGGGCCTCGGGGTGATGGCCGCGAACAAGGTCGTGGCGGACCTGGAGCAGCGCCTCACCGCATAG

Protein sequence :
MSPRRRGTAAVALAVAAALSLAACGGSSDGEKEGSGGQGDKKSVSKDGKDFASAAKKTAAMGTDAKAGQWPRTITHAMGK
TELKAQPKRVVVLDVGELDNVVSLGIKPVGLAPTEGSPELPSYLKKEAGSPKNVGTINNLNLEAIAGLKPDLILGSQLRA
ADKYDELSKIAPTVFSIRPGFTWKQNYLLNAAALDKTAEAKAELADYDKKVKALDTKLGAKKPTVSMVRFMPDGVIRLYA
NASFIGTILKDAHIPRPKNQDVEDLATEISAENIDKADADYIFTGVYGDPKATDRSKAQGNPLWKNLKAVKAGHATDVPD
ETWYLGLGVMAANKVVADLEQRLTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagD YP_003782433.1 iron-siderophore binding protein Virulence PiCp 1 Protein 5e-70 53
fagD YP_005680310.1 Iron siderophore binding protein Not tested PiCp 1 Protein 8e-70 53
fagD YP_005682400.1 Iron siderophore binding protein Virulence PiCp 1 Protein 8e-70 53
fagD YP_005684491.1 Iron siderophore binding protein Virulence PiCp 1 Protein 8e-70 53