Gene Information

Name : SBI_03104 (SBI_03104)
Accession : YP_004961356.1
Strain : Streptomyces bingchenggensis BCW-1
Genome accession: NC_016582
Putative virulence/resistance : Virulence
Product : putative iron-siderophore ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4055038 - 4055958 bp
Length : 921 bp
Strand : +
Note : COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components

DNA sequence : 
GTGACCGACAACCGCCTGACCGCGCGGGAGCTGACCCTCGCGTACGAGGACCGCACGGTCGTCGACGGCCTCGACCTGGA
GATCCCGCACGGCAAGGTCACGGTGATCGTCGGCCCCAACGCCTGCGGCAAGTCCACCCTGCTGCGCGCGCTCGGCCGCC
TTCTCAAGCCGCGGCGCGGCGCGGTGCTGCTGGACGGCGCCGAGCTGTCCCGCCTTCCGACGAAGCGGATCGCCCAGGCC
ATCGGGCTGCTGCCGCAGACCCCGGTGCCGCCGGAGGGGATCACGGTGGCGGATCTGGTCTCGCGCGGGCGGCAGCCGCA
TCAGAAGTGGTGGCAGCAGTGGTCGGAGGACGACGAGCGGGCCGTCGGCGAGGCCATGGAGCGCACCGGGACCGCCGAGC
TCGCCCAGCGCCCGGTCGACGAGCTCTCCGGCGGCCAGCGGCAACGCGTATGGATCGCCATGGCGCTGGCCCAGGACACC
GATGTGCTGCTGCTCGACGAGCCGACGACCTATCTGGACATCGCCCACCAGGTGGAGGTGCTCGACCTGGTGCGGCAGCT
CAACCACGACCGCGGCCGGACCGTGGTCGCGGTGCTGCACGATCTGAACCAGGCGGCGCGCTACGCCGACCATCTGATCG
CCATGCGGGGCGGGCGGATCGTGGCCGAGGGCGCGCCGGGCGACATCGTCACCGCGAAGCTGGTGCGGGAGGTCTTCGGG
CTGGCGTCGGTGGTCGTACCGGATCCGGTGACGGGCGATCCGCTGGTGGTCCCGGGCGCTCCGTGGGCGGCGGACCAGGG
GGCACCCCCAGCGGTAGCCGGGGGGCGCGCTGTCGGAGACGGTGCTGCCGGGGATGGTGCTGCCGGGGGTGGTGTTGCCG
GGGGTGGTGCTACCGCCGCACCCGTACGCAACATAAGGTAA

Protein sequence : 
MTDNRLTARELTLAYEDRTVVDGLDLEIPHGKVTVIVGPNACGKSTLLRALGRLLKPRRGAVLLDGAELSRLPTKRIAQA
IGLLPQTPVPPEGITVADLVSRGRQPHQKWWQQWSEDDERAVGEAMERTGTAELAQRPVDELSGGQRQRVWIAMALAQDT
DVLLLDEPTTYLDIAHQVEVLDLVRQLNHDRGRTVVAVLHDLNQAARYADHLIAMRGGRIVAEGAPGDIVTAKLVREVFG
LASVVVPDPVTGDPLVVPGAPWAADQGAPPAVAGGRAVGDGAAGDGAAGGGVAGGGATAAPVRNIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-74 58
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 7e-65 51
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-65 51
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-65 50
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 7e-65 50
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 7e-66 49
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 7e-66 49
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 6e-59 48
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 1e-36 43
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-52 41
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-56 41
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-56 41
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-56 41
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-56 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SBI_03104 YP_004961356.1 putative iron-siderophore ABC transporter ATP-binding protein BAC0164 Protein 3e-59 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SBI_03104 YP_004961356.1 putative iron-siderophore ABC transporter ATP-binding protein VFG0925 Protein 4e-70 55
SBI_03104 YP_004961356.1 putative iron-siderophore ABC transporter ATP-binding protein VFG1042 Protein 3e-59 48