Gene Information

Name : SBI_02806 (SBI_02806)
Accession : YP_004961058.1
Strain : Streptomyces bingchenggensis BCW-1
Genome accession: NC_016582
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator, winged helix family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3689095 - 3689772 bp
Length : 678 bp
Strand : -
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
GTGCGGCTACTGGTGGTGGAAGACGAGGAAGGGCTCGCGATCGCCCTGAAAAGGGGCCTGGAAGCGGCCGGATACGCGGT
GGACGTGGCCCATGACGGCCTGATCGGGCTGCACATGGCGCGCCAGAACCCGTATCAGGCGATCGTTCTCGACATCATGC
TGCCCGGCCTGAACGGATACCGGGTCTGCGCCAGGCTCCGTGCGGAGGACATCGAGACGCCCATCCTCATGCTGACCGCC
AAGAACGGCGAGTACGACGAGGCCGAGGCGCTGGACACCGGCGCCGACGACTTCCTGGCCAAGCCCTTCTCCTATGTGGT
GCTCGAGGCCCGGCTGCGGGCCCTGCTCCGCCGCGGCGGCGCCCGGACCCGCACCGTGCTGCGCATCGGGGACCTGTGGA
TAGACCCGGCGGGCCGGTCCAGCGGCCGTGGCGATGTCCAGTTCAGGCTGACCGCCAAGGAGTTCGCGGTGCTGGAATGC
CTTGCGCGGCGGGCCGGTGAAGTGGTCCCCAAGATAGACATCGTCGATCAGGTCTGGTCGGCGGATTTCGAAGGTGATCT
GAACATCGTCGAGGTGTACGTGAGCGCCCTGCGCCGGAAGATCGACACGCCTTTCGGCCGTGCGTCGATCGAGACAGTAC
GAGGCATCGGCTACCGCATGACCGGCCATGGAGTCTGA

Protein sequence : 
MRLLVVEDEEGLAIALKRGLEAAGYAVDVAHDGLIGLHMARQNPYQAIVLDIMLPGLNGYRVCARLRAEDIETPILMLTA
KNGEYDEAEALDTGADDFLAKPFSYVVLEARLRALLRRGGARTRTVLRIGDLWIDPAGRSSGRGDVQFRLTAKEFAVLEC
LARRAGEVVPKIDIVDQVWSADFEGDLNIVEVYVSALRRKIDTPFGRASIETVRGIGYRMTGHGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-32 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 8e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SBI_02806 YP_004961058.1 two component transcriptional regulator, winged helix family protein BAC0197 Protein 7e-33 48
SBI_02806 YP_004961058.1 two component transcriptional regulator, winged helix family protein BAC0125 Protein 2e-36 46
SBI_02806 YP_004961058.1 two component transcriptional regulator, winged helix family protein BAC0111 Protein 7e-35 44
SBI_02806 YP_004961058.1 two component transcriptional regulator, winged helix family protein BAC0308 Protein 7e-32 43
SBI_02806 YP_004961058.1 two component transcriptional regulator, winged helix family protein BAC0083 Protein 7e-33 42
SBI_02806 YP_004961058.1 two component transcriptional regulator, winged helix family protein BAC0638 Protein 2e-25 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SBI_02806 YP_004961058.1 two component transcriptional regulator, winged helix family protein VFG0596 Protein 9e-33 42
SBI_02806 YP_004961058.1 two component transcriptional regulator, winged helix family protein VFG1390 Protein 2e-33 41