Gene Information

Name : SBI_01591 (SBI_01591)
Accession : YP_004959843.1
Strain : Streptomyces bingchenggensis BCW-1
Genome accession: NC_016582
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2162524 - 2163399 bp
Length : 876 bp
Strand : +
Note : COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components

DNA sequence : 
ATGTCGGCTGATCCCCTGCCGGCCCCCGACCCGGACCTGCGGGCGAGTGGTCTGCGCCTGGCCTACGACAACCGGCTGGT
GGTGGACGGCCTCGACCTGGCCGTACCCCCCGGACGGATCACGGCCATCGTCGGCGCCAACGCCTGCGGCAAGTCCACCC
TGCTGCGCGCCCTCGCCCGGCTGCTCGCGCCACGCAGGGGCGCCGTCCATCTCGACGGCCGGGAGCTGCACTCCATCCCG
CCCCGGGAGCTGGCCCGGCGGCTCGGCATCCTGCCGCAGAGCCCGGCGGCGCCGGACGGGCTGACCGTCATCGATCTGGT
GGGGCGCGGCCGTTCACCGCACCAGACGTGGTGGCGGCAGTGGTCGGGCGCCGACGAGCAGGCCGTCCAGCGGGCGCTGG
CCGCCACCGGTATGACCGAGCTGGCGGACCGGCCGCTGGACGAACTGTCCGGTGGCCAGCGTCAGCGCGCCTGGATCGCC
ATGGCGGTGGCGCAGGACACCGCGGTGCTGCTGCTGGACGAGCCGACGACGTACCTGGATCTGGCGCACCAGATCGATGT
CCTGGACCTGGTCACGGACCTCAACCGGCGGGAGAGCCGCACGGTGGTGATGGTGTTGCACGACCTCAACCAGGCCTGCC
GCTACGCCGACCACGTGGTGGCCATGAAGGCGGGGCGGATCGCCGCCGAGGGCGCGCCCGCCGAGGTCATCACCGCCGAG
ACCGTCGAGGACATCTTCGGCCTCAGCTGCCAGGTCACCTCGGACCCGGTCAGCGGCACCCCGATGGTCATCCCGATGGG
GCGCCACCACGGGGAGCGGCGCGAGCGGCCGGCCGTACACCCCCCACGCACCGTCACTGCACCGACCCGACCATGA

Protein sequence : 
MSADPLPAPDPDLRASGLRLAYDNRLVVDGLDLAVPPGRITAIVGANACGKSTLLRALARLLAPRRGAVHLDGRELHSIP
PRELARRLGILPQSPAAPDGLTVIDLVGRGRSPHQTWWRQWSGADEQAVQRALAATGMTELADRPLDELSGGQRQRAWIA
MAVAQDTAVLLLDEPTTYLDLAHQIDVLDLVTDLNRRESRTVVMVLHDLNQACRYADHVVAMKAGRIAAEGAPAEVITAE
TVEDIFGLSCQVTSDPVSGTPMVIPMGRHHGERRERPAVHPPRTVTAPTRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 6e-63 56
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-53 48
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-53 48
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-53 48
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-53 48
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-49 47
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 6e-48 47
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-58 45
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-58 45
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 2e-34 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SBI_01591 YP_004959843.1 ABC transporter BAC0164 Protein 1e-49 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SBI_01591 YP_004959843.1 ABC transporter VFG0925 Protein 4e-64 54
SBI_01591 YP_004959843.1 ABC transporter VFG1042 Protein 1e-49 47