Gene Information

Name : SBI_01426 (SBI_01426)
Accession : YP_004959678.1
Strain : Streptomyces bingchenggensis BCW-1
Genome accession: NC_016582
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1973920 - 1975446 bp
Length : 1527 bp
Strand : -
Note : COG1012 NAD-dependent aldehyde dehydrogenases

DNA sequence :
GTGACGCCGGGATCGGGAACCCAGGACAACGGACCGCGGGGCGGCGGCCCGACCCAGAAGGAGAACACCTTGGACCCCAG
CATCGTGCTCCCCCGGCTGCCGGACTGCGAGCCCATGCTCATCGGCGGGGAGTGGACCACGGGCACCGCGCGGGAGCGGA
TCCCGGTGCTCGACCCCGCCACCCAGGAGCAGCTCACCACCATCGCCCAGGCCGGTCCCGAGGAGGTGTCCGCCGCGGTG
GCGCCCGCCGCCGACGCGCACCGTGACCGGCGATGGCGCGGACTGCCGCCCCGCCTCCGCCGCGACGTGCTGTTGCGCCT
CGCCGAGCTGGTGGCACGCGACGCCGAGGAGCTGGCGGTGCTGGACACGCTGGACAACGGCAAGGCCATCGAGCGGGCGC
GCGGCGATGTGGACCTCGGCCTGCAGGCCATCCGCCACTTCGCGGGCGCCCCGACCCGGCTGTCGGGCACTGTGCACGCA
TCCGGCGCCGACCGGCATGTCTACAGCGTGCGCGAGCCGGTCGGCGTGGTCGCCGCCGTACTGCCGTGGAACTTCCCCTT
CATGATCGCGGCGTGGAAGATCGCCCCCGCTCTGGCCGCCGGCTGCACGGTCGTGGTCAAGCCGGCCGAGCAGACCCCGC
TCACCGCGCTGCGGCTGGCCGCGCTCTGCCTGGAGGCGGGCGTGCCCGAGGGCGTGGTCAACGTGGTGACCGGTGACGGG
CGTACGGGTGCGGAACTGGTCGCCCATCCCGACGTCGCCAAGGTGTCCTTCACCGGGTCCACCGAGGTGGGGCGGCTGAT
CATGGCCGCGGCGGCGCCGTCGGTCAAGCGGCTCACCCTCGAACTGGGCGGCAAGTCGCCCAACATCGTCTTCGCGGACG
CCGATCTGGACGCCGCGGCCCCGGCCGCCGTGCGTGCGGTGTTCGGGCACTCCGGACAGATGTGCACCGCCGGAAGCAGG
CTGCTGGTGGAGAGGCCGGTCGTCAAGGAGCTGCTCGATCGGCTGCTGCCGGCGGTGGAGGCACTGCGGATCGGCCCCGG
GCTGGCGGGCGGCATCAACATCGGTCCTCTGGTGTCCCAGGAGCAGTACGACCGCGTCAGCGGCTACCTCGGCCTGGGCC
GGGCCGAGGGCGCCAAGGTGGCCGCGGGTGGCGAACCGCTGCCCGGACCGGGCTGGTTCGTGCGGCCGACGGTGTTCACC
GGCGTCAGCCCCGGCATGCGGATCGCCAGGGAGGAGATCTTCGGCCCGGTCGCCACGGTCATCCCGTTCGACACGGAGGA
TGAAGCGATCGCCCTGGCCAACGACAGCGACTACGGACTTGCCGCCGGTGTGTGGACCGGCAGTCTGGCACGCGCCCACC
GCACGGTCGCGGCGCTGGAGGCCGGCACCGTGTGGGTCAACACCTACAACGAGTTCGACCCCGCCGTGGCCTTCGGCGGG
ATGAAGCAGTCCGGCCTCGGCAGGGACCTCGGCGACGCCGCCGTCGACGGGTTCACCGAGCTCAAGAGCGTCACGATCGC
CCTGTGA

Protein sequence :
MTPGSGTQDNGPRGGGPTQKENTLDPSIVLPRLPDCEPMLIGGEWTTGTARERIPVLDPATQEQLTTIAQAGPEEVSAAV
APAADAHRDRRWRGLPPRLRRDVLLRLAELVARDAEELAVLDTLDNGKAIERARGDVDLGLQAIRHFAGAPTRLSGTVHA
SGADRHVYSVREPVGVVAAVLPWNFPFMIAAWKIAPALAAGCTVVVKPAEQTPLTALRLAALCLEAGVPEGVVNVVTGDG
RTGAELVAHPDVAKVSFTGSTEVGRLIMAAAAPSVKRLTLELGGKSPNIVFADADLDAAAPAAVRAVFGHSGQMCTAGSR
LLVERPVVKELLDRLLPAVEALRIGPGLAGGINIGPLVSQEQYDRVSGYLGLGRAEGAKVAAGGEPLPGPGWFVRPTVFT
GVSPGMRIAREEIFGPVATVIPFDTEDEAIALANDSDYGLAAGVWTGSLARAHRTVAALEAGTVWVNTYNEFDPAVAFGG
MKQSGLGRDLGDAAVDGFTELKSVTIAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 1e-64 49
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 6e-55 44
hpaE AAO17179.1 HpaE Not tested tcd island Protein 6e-56 44
unnamed AAK01506.1 putative aldehyde dehydrogenase Not tested PAGI-1 Protein 4e-54 43
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-59 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 1e-59 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 1e-59 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 1e-59 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-59 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SBI_01426 YP_004959678.1 aldehyde dehydrogenase VFG0082 Protein 8e-60 41