Gene Information

Name : intS (EcWSU1_00854)
Accession : YP_004950715.1
Strain : Enterobacter cloacae EcWSU1
Genome accession: NC_016514
Putative virulence/resistance : Unknown
Product : prophage CPS-53 integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 899878 - 901137 bp
Length : 1260 bp
Strand : +
Note : -

DNA sequence : 
TTGAAATCAACTCGCAATTGGGGGCACAATCAGGGGCATGTTCTGTTCGGTCTAGGAAATGTGCCCCCAATGATGCTGAA
TGCCCGCAAGGTTGAAGCTGCGAAAGGAAAAGAGAAGAGCTACAAGCTGTCTGATGGAGGTGGACTTTACCTTCAGGTTG
AACCGAATGGCTCGCGTTACTGGCGTATGAAGTACCGTTTTGCTGGTAAAGAGAAGCGCTTGTCCTTTGGTGTTTATCCA
ACAGTCACACTTGCTGATGCCAGACAAAAACGAGAAGACGCAAAGAAACTTCTCGCAGCAGGTGAAGATCCTGGCGAAGT
GAAAAAAGCAAAAAAGCAGGCTTTAAACGCAGCGATTGAGACACTTAACCCATTCAGAGACGTGGCGTTAGAGTGGCACA
AAATGAAATCTCCCAAATGGTCTGAGGGCTATGCTTCAGATATCATTGAAGCATTTGAGAAAGACATTTTCCCGCATATT
GGACATAGACCTATAGCTGATATTCAGCCCCTGGAACTGCTTGGAGTTCTGAGGTTGATAGAAGCACGAGGCGCTATGGA
GAAAGCGAAGAAAGTCCGTCAGCGATGCGGTGAAGTTTTCCGCTATGCCATCGTAACGGGTAGAGCAATCTACAATCCGG
CACCGGATCTTGCCAGCGCGATGCAAGGACATGAAGCAGTCCACTATCCATTCCTCAAAGCCAAAGAGTTGCCGGAGTTC
TTTACTGCCCTTAATGCTTATTCAGGAAGCCCAATTGTATTGTTGGGGGCACAATTGCTTATCCTGACAGGCCTAAGAAC
TGGAGAACTAAGGGCAGGTGAGTGGAGTGAGGTGGACTTTAATAATGCGGTGTGGGAGATCCCAAAGGAACGTATGAAAA
TGCGTAGGAGCCATATTGTTCCGTTGCCAAAACAAGCATTATCCCATCTCAAAAGTTTGAAAGACCTAACTGGGAACTAC
CCGCTGATGTTCCCTGGACGCAACGATCCTAGCAAACCTATGAGTGAAGCAAGCATTAATCAGGTTTTTAAACGTATTGG
ATATGCAGGGCGTGTTACGGGACATGGTTTCAGGCATACGATGAGTACGATTCTACATGAGAAAGGATTTAACAGCGCTT
GGATTGAAACCCAGCTTGCTCATTTGGACAAAAATTCTATTCGTGGAATTTATAACCATGCCCAATATCTCGAAGGGCGA
AGAGAAATGATGCAATGGTATGCTAATTATTTATCTGAGCTGGTTGGTACTCATAAATGA

Protein sequence : 
MKSTRNWGHNQGHVLFGLGNVPPMMLNARKVEAAKGKEKSYKLSDGGGLYLQVEPNGSRYWRMKYRFAGKEKRLSFGVYP
TVTLADARQKREDAKKLLAAGEDPGEVKKAKKQALNAAIETLNPFRDVALEWHKMKSPKWSEGYASDIIEAFEKDIFPHI
GHRPIADIQPLELLGVLRLIEARGAMEKAKKVRQRCGEVFRYAIVTGRAIYNPAPDLASAMQGHEAVHYPFLKAKELPEF
FTALNAYSGSPIVLLGAQLLILTGLRTGELRAGEWSEVDFNNAVWEIPKERMKMRRSHIVPLPKQALSHLKSLKDLTGNY
PLMFPGRNDPSKPMSEASINQVFKRIGYAGRVTGHGFRHTMSTILHEKGFNSAWIETQLAHLDKNSIRGIYNHAQYLEGR
REMMQWYANYLSELVGTHK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_03025 YP_001439090.1 hypothetical protein Not tested Not named Protein 1e-168 91
int AAC31482.1 CP4-like integrase Not tested LEE Protein 2e-123 64
int ACU09430.1 integrase Not tested LEE Protein 2e-123 64
intL NP_290239.1 integrase for prophage 933L and the LEE pathogenicity island Not tested LEE Protein 2e-123 64
ECs4534 NP_312561.1 integrase Not tested LEE Protein 2e-123 64
int CAC39282.1 integrase Not tested LPA Protein 2e-122 63
aec33 AAW51716.1 Int Not tested AGI-3 Protein 8e-123 63
S4835 NP_839238.1 integrase Not tested SHI-2 Protein 9e-122 63
SF3698 NP_709437.1 integrase Not tested SHI-2 Protein 9e-122 63
int AAD54663.1 Sai integrase Not tested SHI-2 Protein 7e-122 63
int AAD44730.1 Int Not tested SHI-2 Protein 1e-121 62
unnamed AFX83955.1 integrase Not tested SE-PAI Protein 8e-121 61
STY4821 NP_458899.1 integrase Not tested SPI-10 Protein 1e-70 42
SESS1296_03598 AFO66301.1 bacteriophage integrase Not tested SESS LEE Protein 5e-74 42
SESS1635_03816 AFO66367.1 bacteriophage integrase Not tested SESS LEE Protein 5e-74 42
intA AAB00935.1 integrase A Not tested vap locus Protein 9e-57 41
int AAL51003.1 CP4-like integrase Not tested LEE Protein 4e-72 41
int AAT48697.1 CP4-like integrase Not tested PAI I 4787 Protein 3e-72 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
intS YP_004950715.1 prophage CPS-53 integrase VFG0783 Protein 9e-124 64
intS YP_004950715.1 prophage CPS-53 integrase VFG0598 Protein 4e-122 63