Gene Information

Name : hofB (EcWSU1_00719)
Accession : YP_004950580.1
Strain : Enterobacter cloacae EcWSU1
Genome accession: NC_016514
Putative virulence/resistance : Virulence
Product : protein transport protein hofB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 756018 - 757442 bp
Length : 1425 bp
Strand : -
Note : -

DNA sequence :
GTGAAGACGTTTTCCGCTTCGACACCCACTGAGGAGCGGATGATGAATACCGATCAGCTTGTCGCACTTTGTCTGCGTCA
TCATGCCCTTCTGCTGAGCAGCGATAGCGACATGATTAGCATTGCCGTCGTGGGAAACCCCGGCCCTGAACTGATGGAAG
CCCTGCGTTTCGCTACCCAGAAACGGATTGATATCGAGTGCTGGAGCGCCGAGCGCATGGAAAAGCACCGGCAGTTAACC
ACACAAACGCATCTGCCCGTCGTTACGCCGACACACTCAGCGGTGGATATTCTTAACCACACGCTGCAGCAGGCGATAAA
CCAACGCGCTTCCGATATTCATATTGAACCGATGGAGCAGACTTGCCAGATTCGCCTGCGCATCGACGGCGTGCTTTGCC
CGCAGCCCCCACTTTCAGCCGCGCTGGCCACCATGCTCAGCGCCCGGTTAAAAGTGCTGGGTAACCTCGATATTGCGGAG
CGCCGCTTACCGCAGGACGGTCAGTTTACGATTGAGCTGGCAAACGAGCCGGTCTCATTTCGCATCGCCACGCTTCCCTG
CAGCGGCGGTGAAAAAATTGTACTGCGCCTGCTGCATCAGGTTCAGCAATCTCTTGAGCCAGAAACGTTGGGGATGAATA
CTAAACAGCTGGCCGGCTTTAGCGAAGTGCTCCACCAGCCGCAGGGGCTGATTCTGGTTACCGGCCCCACCGGCAGCGGT
AAAACCGTAACGCTGTACAGCGCGCTGCAGGCTCGAAACACGCCGGATGTGAACATCTGCAGCGTGGAAGACCCGATAGA
GATCCCGCTTGCAGGATTAAACCAGACGCAGATAAACCCGCGTGCGGGCCTTACCTTCCAGACGGTGCTGAGAGCGCTGC
TACGTCAGGATCCTGACATCATTATGGTCGGCGAAATTCGTGATGGCGAAACGGCAGAGATTGCCATTAATGCCGCACAA
ACCGGGCATCTGGTGTTGTCGACGCTACACACCAACTCGACGGCGGAAACCCTGATCCGCCTGCAGCAGATGGGGGTGGC
GCGATGGATGATCTCTTCCGCCCTCTCGCTGGTCATCGCCCAGCGACTGGTGCGCCGTTTATGCCCCCATTGCCGCCAGG
AAACCGACAAGCGGGCAGAACTGCCTCGCTCCGTTTGGCCCCGGCCGCTGCCGCGCTGGCAACCCACCGGCTGTGAGCGC
TGTTATCACGGTTTTTATGGTCGCGTCGCCATTTTTGAAGTGCTCGTCATTGACCAGACACTCCGGCAGGCCATTGCCAG
CGGAGCGGGGTCAGAGGTGATTGAGGCCAGCGCCCGTCAGGCAGGAATGACATCCCTTTTCGAACATGGCTGTATGGCTG
TTGAACAGGGACTGACCACGCTCGAAGAGTTGCTGCGTATCCTGGGAATGCCCGATGGCTGCTAA

Protein sequence :
MKTFSASTPTEERMMNTDQLVALCLRHHALLLSSDSDMISIAVVGNPGPELMEALRFATQKRIDIECWSAERMEKHRQLT
TQTHLPVVTPTHSAVDILNHTLQQAINQRASDIHIEPMEQTCQIRLRIDGVLCPQPPLSAALATMLSARLKVLGNLDIAE
RRLPQDGQFTIELANEPVSFRIATLPCSGGEKIVLRLLHQVQQSLEPETLGMNTKQLAGFSEVLHQPQGLILVTGPTGSG
KTVTLYSALQARNTPDVNICSVEDPIEIPLAGLNQTQINPRAGLTFQTVLRALLRQDPDIIMVGEIRDGETAEIAINAAQ
TGHLVLSTLHTNSTAETLIRLQQMGVARWMISSALSLVIAQRLVRRLCPHCRQETDKRAELPRSVWPRPLPRWQPTGCER
CYHGFYGRVAIFEVLVIDQTLRQAIASGAGSEVIEASARQAGMTSLFEHGCMAVEQGLTTLEELLRILGMPDGC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 6e-73 47
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 5e-73 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hofB YP_004950580.1 protein transport protein hofB VFG2048 Protein 9e-76 49
hofB YP_004950580.1 protein transport protein hofB VFG2426 Protein 7e-69 46
hofB YP_004950580.1 protein transport protein hofB VFG0182 Protein 3e-70 45
hofB YP_004950580.1 protein transport protein hofB VFG1876 Protein 4e-72 43