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Name : fimD (EcWSU1_02030) Accession : YP_004951888.1 Strain : Enterobacter cloacae EcWSU1 Genome accession: NC_016514 Putative virulence/resistance : Virulence Product : outer membrane usher protein fimD Function : - COG functional category : - COG ID : - EC number : - Position : 2086394 - 2088991 bp Length : 2598 bp Strand : - Note : - DNA sequence : ATGAAGAAATCATATATATCGCTAGCCTTGACTAGTTTTATTTTTCAGCCGGGTATTGTCGCCCACGCCTCTGATCTTTA TTTCCCCCCTGAATTTATGGGAGCAGACGCTGACACAGCTGACTTGGATATGTTCCAGTCTGCCGGTGCGCAGAGTCCGG GTGAATACCTGGTGGAAGTTTTTTTGAATGATAGGAATCAGGGGCAGCGAACGCTGACATTTAACAGGCGCGAAACCCAA ACAGATCAGGTTCGCAGCAGAGACAACACCGGCCTCTCGGTATGTCTAACAAAGGAAATGATGGCTTCTCTGGGCGTGAA AATCGCACTATTTCCGGAACTGAAATCCTTGGGGGAAGAAGTATGCGTAACCCCGGAAAAAATAATTCCGGATGCTAACA CCCGCTTTGACTTCACCAAAATGCAGCTGTTTATCAGTATCCCGCAAGCTTCTCTGCATAACCAGGCGCGCGGGTATATC GAACCTTCGCTCTGGGATGAGGGAATTAATGCGGCTTTGCTTAATTACAATTTCAGTGGGGGGAGTACATTCGCCGGTGA TTTTAATAGTGATAATTATTTCCTGAACCTGAATAGCGGGCTGAATCTCGGAGCGTGGCGCCTGCGCGATTTCCGGACCT GGAGTTATTACAGTAACAAATACCAGACCCTGCAATCCTGGCAACGGCTTAAAACGTACGCTGAGCGCTCTGTTATTCCC CTACGCAGCAATCTGGTGATTGGAGAAAGTTCGACCTCAAACCAGGTTTTTGACTCAATGGGCTTTAAGGGCATCAACTT GTCCACTGATGACAACATGTATCCCGACACCATGCGAGGATTTGCGCCGGTGATCCGCGGCATCGCAGAAAGTAATGCGC AGGTGATGGTTCGCCAGAATGGTTACAACATTTACCAAACGAACGTCTCTCCAGGGGCATTTGAGATAACTGACCTTTAC CCCATGTACAGCAGCGGTGATCTGGAGGTCAGCGTAAAAGAGGCCAACGGTAACACGCAAGTATTTACCGTGCCTTACTC CTCAGTTCCAATATTGCAGCGTGAAGGCCGCGTGACGTACAGCCTGACCGCTGGTCGCTTTTCCGGCAGCAGTGATCGGT ACGACAACCCCGCGTTTGGCGAAGCCTCATTGCTATGGGGCCTACCTCATAACGTAACCGTGTATGGCGGCGCTCAGTAT TCTGATAACTATCTGGCTGAGCAACTGGGGCTGGGTATAAATCTGGGTAGAATCGGCGCATTCTCTGCGGACGTGACACA TGCAGACAGTACTCTTGCCGATGGTTCCAGTCATAAGGGGCAATCAGTCCGATTCCTCTATGCACATTCATTTAACCCGA CTGGAACAAATTTACGGCTGACCGGTTATCGCTATTCAACAAAAGGCTTCCATACCCTCGACGAAACGGCGCTGAAAACT ATGCGAGGCCGTCTGTATGAACATGACGAATATGATGAATACGGTAATCGAGTCCAGGATACCTATTCTGACTACTACAA CCTGTACAACACCAAACGGGCAAGGTTAGAAGCCAATATTTCTCAAAGCCTCGGTAACGCTGGATCGCTTTATATCACAG GAATCCGACAGACTTATTGGAATTCGGGAAATTCCACCACCTCCCTGCAGAGTGGTTATAGCAGCATTCTGGGGCCAGTT AATTACGCCCTATCGTACAGCTATAACCAGCAAAAGAATCAAAACTACCCATCATGGACTGATAAGACATTCAATCTGTC ACTGTCGGTACCACTTGACCGCTTATTTTCATGGAATAGTAATTCGCGTTCCGTCAACGCAACTTTCAATGGTAGCCGGG ATAACCATGGCAACCTAAGTCAGCAGGCGGGGCTGAGCGGAACGGCACTCGACGGCAATACCCTGAACTGGAGTGTATCT CAGGGCTACAGTCACAGCAGTAATGGGTACAGCAGCGGCGGTACCGGGAATGCCGGTATGAATCACCGCGGTGGTTATGG CACTTCATCTCTGGGTTACAGCTACAGCGAGGATTACCAGCGCGTCAACTACGGTCTGAGCGGCGCGCTGATCGCGCATC GTAATGGGCTGACACAGGGACAACAGGTGGTGGGAAGCGCGGTATTGGTAGCCGCTCCAGGCGCCAACGGTGTGAATGTG AAGGGAGCAACCGGTGTATCCACGGACTGGCGAGGCTATGCGATCCAACCTTATGCCACTGCCTATCGTGAAAACAATGT GTCGTTGGACACCAGTACACTTGATGACAAAACCGATATCGAGAGCGGAGTAGCACGCGTAGTACCGACTAAAGGGGCGA TTGTGCGGGCACGCTTTGATGTTCAACGTGGTCACCGCGTCATTATGACCCTCACCTATGACGGGAAACCGCTTCCATTT GGCACCATGATTGCCGGTGAGAACGTCAGCGGCATTGTCGGAGATGGCGGTCAAGTATATCTCTCAGGCCTTCAAGATAA CGGCACACTTAAGGCGAAGTGGGGTGTACAGGGTAATCAGCAGTGCGCTATCAGTTACCGGATCAGTGAACAGGAACAAA ATGCCACTATCGCGAATGTTACCGCCTCATGCCGGTAA Protein sequence : MKKSYISLALTSFIFQPGIVAHASDLYFPPEFMGADADTADLDMFQSAGAQSPGEYLVEVFLNDRNQGQRTLTFNRRETQ TDQVRSRDNTGLSVCLTKEMMASLGVKIALFPELKSLGEEVCVTPEKIIPDANTRFDFTKMQLFISIPQASLHNQARGYI EPSLWDEGINAALLNYNFSGGSTFAGDFNSDNYFLNLNSGLNLGAWRLRDFRTWSYYSNKYQTLQSWQRLKTYAERSVIP LRSNLVIGESSTSNQVFDSMGFKGINLSTDDNMYPDTMRGFAPVIRGIAESNAQVMVRQNGYNIYQTNVSPGAFEITDLY PMYSSGDLEVSVKEANGNTQVFTVPYSSVPILQREGRVTYSLTAGRFSGSSDRYDNPAFGEASLLWGLPHNVTVYGGAQY SDNYLAEQLGLGINLGRIGAFSADVTHADSTLADGSSHKGQSVRFLYAHSFNPTGTNLRLTGYRYSTKGFHTLDETALKT MRGRLYEHDEYDEYGNRVQDTYSDYYNLYNTKRARLEANISQSLGNAGSLYITGIRQTYWNSGNSTTSLQSGYSSILGPV NYALSYSYNQQKNQNYPSWTDKTFNLSLSVPLDRLFSWNSNSRSVNATFNGSRDNHGNLSQQAGLSGTALDGNTLNWSVS QGYSHSSNGYSSGGTGNAGMNHRGGYGTSSLGYSYSEDYQRVNYGLSGALIAHRNGLTQGQQVVGSAVLVAAPGANGVNV KGATGVSTDWRGYAIQPYATAYRENNVSLDTSTLDDKTDIESGVARVVPTKGAIVRARFDVQRGHRVIMTLTYDGKPLPF GTMIAGENVSGIVGDGGQVYLSGLQDNGTLKAKWGVQGNQQCAISYRISEQEQNATIANVTASCR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fim2D | AFH78429.1 | putative fimbrial usher protein | Virulence | KpGI-5 | Protein | 2e-160 | 43 |
| sfaF | CAC16953.2 | SfaF protein | Virulence | PAI III 536 | Protein | 4e-159 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fimD | YP_004951888.1 | outer membrane usher protein fimD | VFG0446 | Protein | 1e-150 | 45 |
| fimD | YP_004951888.1 | outer membrane usher protein fimD | VFG0876 | Protein | 4e-162 | 44 |
| fimD | YP_004951888.1 | outer membrane usher protein fimD | VFG1645 | Protein | 2e-159 | 43 |
| fimD | YP_004951888.1 | outer membrane usher protein fimD | VFG0912 | Protein | 2e-159 | 43 |
| fimD | YP_004951888.1 | outer membrane usher protein fimD | VFG0454 | Protein | 1e-151 | 42 |
