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Name : fimD (EcWSU1_01046) Accession : YP_004950907.1 Strain : Enterobacter cloacae EcWSU1 Genome accession: NC_016514 Putative virulence/resistance : Virulence Product : outer membrane usher protein fimD Function : - COG functional category : - COG ID : - EC number : - Position : 1095577 - 1098156 bp Length : 2580 bp Strand : + Note : - DNA sequence : GTGAGCAGAGTCAGCGCGATGAATAATCACCAGGGACGTTACTGCCCGGTCGCACTGGCGCTGATGGCAGCGCTCTGGCC ACAGGCTGGCTGGAGCGAAAGCTACTTTAACCCGGCCTTCTTGTCCGATGACACCGCCAACGTGGCGGATTTATCGCGTT TTGAACAAGGTCACCAGCAGGCGCCTGGCGTTTATCGCGTGGATATCTGGCGTAACGATGAGTTTATCGCGACGCAGGAT GTGCGCTTCGAGCAGGCCGACAATACACCGCCGGTTGCTGGTGGGCTGTCGCCGTGCATTACGCGCGTGATGCTGGAGCG TTTTGGCGTCAATATCGCGGCCTTTCCTGAGCTGGTTAACGTGAAAGGGGAGACCTGTATTCCCCTGGAGAAGGCTATTC CCGGTAGTGAGATCGCGTTCAACTTCGCCTCGCTGCGCCTGAATATCAGCCTGCCACAGGTGGCGATGCAGAACAGCGCA CGCGGTTATATTCCGCCCGATCAATGGGATGAAGGGATCCCTGCCGCGCTGGTGAACTACAGCTTTACCGGCAACCGCGG GAGCGAGGACGACAGCTATTATCTGAACCTGCAGAGCGGGCTGAACTATGGCGCGTGGCGTTTACGCAATAATGGCGCAT GGCGTTACACGCAGAATAACGGGCAGCGGCACAGCAACTGGCAGAATATTGGCACCTGGGCGCAGCGCACCGTGATCCCG CTGAAAAGCGAGCTGGTGCTGGGCGACAGCAATACCGGTAATGACGTTTTCGACAGCGTGGGTTTTCGCGGCGGGCGGCT CTTCTCGTCTGACAGCATGTACCCGGACAGCCTGCAGGGCTACGCACCAACCGTTCGCGGCATCGCCCGGACGCCCGCCA AAGTGGTCGTTCGACAAAACGGCTACGTTATCTATCAAAGCTATGTACAGCCTGGCGCCTTTGCCATCACCGATCTTAAC CCAACCTCGTCAAGCGGTGACCTTGAGGTGACGGTTGAAGAGAAGGATGGCAGCCAGCAGCGCTATACCGTGCCGTATTC CACCGTGCCCCTCCTGCAGCGCGAAGGGCGCTGGAAGTATGACCTGGTGGCCGGGGATTACCGCAGCGGCAACAGCGAAC AGGATACGCCATTCTTCACGCAGGGTACGTTGATTACCGGGCTTGGCGACGGCTACACGCTGTACGGCGGTACCCAGCTG GCGTCACGTTATACCGCGGTGGCTATCGGGGCCGGGAAAAACCTCGGTGACTGGGGGGCAGTGTCGCTCGATATCACCCA TGCCCGCAGCCAGCTTGCGGATGACAGCCGCCATGAAGGGCAGTCGCTGCGTTTCCTCTATGCAAAATCGCTTAACGGAT TCGGAACCAACTTCCAGCTGCTGGGCTACCGCTACTCCACAAAAGGGTTCTACACCCTGGACGATGTCGCGTGGCGCTCA ATGGAAGGCTACCAGTATGCCGACAACCAGGATGATGACGGTGTGCCGGATGTGGAGAGTTATCACAACCTGACGTGGAA TAAAAAAGGGCGCTTCCAGCTCAATATTTCCCAGTCGCTGGGGGATTACGGCTCGGTCTATATCTCCGGTAGCGAACAAA CGTACTGGGGCACCGATGAGTCCAACCTCTGGTATCAGCTGGGATACGCGGGCGGTGTGAAGGGCGTTAACTACTCCGTG TCCTGGTCATGGAACAAATCGGTCGGGATAGACGGCACGGACCGAATCGCGTCGTTTAACGTCTCCGTACCGTTCAGCCT CTTTACCCGCCAGGGTTTTCGTCGGGACAGCGCCATTGACCGCGCCTATGCCACGGCGTCAGCCAGCCGTAATAGTGATG GCGACACAAGCTGGCAAACCGGGGTCAGTGGGACGTTGCTGGAAGATCGCAACCTGAACTACAGCGTGACCCAGGGCCAC ACCAGCAATAACGGCTCAAGCGGAAGCGCCAGCGCGAACTGGCAGGCAACCTACGGCACGCTGGGTGTTGGCTACAACTA CGCACGCGACCAGCACGATCTCAACTGGCAGCTCTCCGGCGGCGTGGTCGGCCATGCGGATGGCGTAACCTTCAGCCAGC CGCTGGGTGATACCAACGTTCTGATCAAAGCGCCGGGAGCATCGGGCGTGAGCGTGGAAAACCAGACCGGTGTGAAAACC GACTGGCGTGGCTATGCGGTGATGCCGTATGCCACCGTCTACCGCTATAACCGCGTAGCGCTGGATACCAACACCATGAG CAATAACACCGATATCGAAAATAACGTGAGCAGCGTGGTGCCGACAAAAGGGGCGCTGGTGCGCGCCAGCTTTGATACCC GTATTGGCGTGCGCGCCCTGCTGACCGTCACGCGCGGCAACCAGCCTGTGCCATTCGGTGCCGTGGTGCGTGAAACCCAG AGCGGCGTCACCAGTATGGTGGGCGATGACGGACAGATTTACCTGAGCGGCCTGCCGCTGGAAGGTGAACTGCTGATCCA GTGGGGCAACGGGATGCAATCCCAGTGTCGTGCGCACTACAGCTTGCCAGAAAAGAGCCTGCAACAGGCAATCACACTTA AGGGGATTCGCTGTGAGTAA Protein sequence : MSRVSAMNNHQGRYCPVALALMAALWPQAGWSESYFNPAFLSDDTANVADLSRFEQGHQQAPGVYRVDIWRNDEFIATQD VRFEQADNTPPVAGGLSPCITRVMLERFGVNIAAFPELVNVKGETCIPLEKAIPGSEIAFNFASLRLNISLPQVAMQNSA RGYIPPDQWDEGIPAALVNYSFTGNRGSEDDSYYLNLQSGLNYGAWRLRNNGAWRYTQNNGQRHSNWQNIGTWAQRTVIP LKSELVLGDSNTGNDVFDSVGFRGGRLFSSDSMYPDSLQGYAPTVRGIARTPAKVVVRQNGYVIYQSYVQPGAFAITDLN PTSSSGDLEVTVEEKDGSQQRYTVPYSTVPLLQREGRWKYDLVAGDYRSGNSEQDTPFFTQGTLITGLGDGYTLYGGTQL ASRYTAVAIGAGKNLGDWGAVSLDITHARSQLADDSRHEGQSLRFLYAKSLNGFGTNFQLLGYRYSTKGFYTLDDVAWRS MEGYQYADNQDDDGVPDVESYHNLTWNKKGRFQLNISQSLGDYGSVYISGSEQTYWGTDESNLWYQLGYAGGVKGVNYSV SWSWNKSVGIDGTDRIASFNVSVPFSLFTRQGFRRDSAIDRAYATASASRNSDGDTSWQTGVSGTLLEDRNLNYSVTQGH TSNNGSSGSASANWQATYGTLGVGYNYARDQHDLNWQLSGGVVGHADGVTFSQPLGDTNVLIKAPGASGVSVENQTGVKT DWRGYAVMPYATVYRYNRVALDTNTMSNNTDIENNVSSVVPTKGALVRASFDTRIGVRALLTVTRGNQPVPFGAVVRETQ SGVTSMVGDDGQIYLSGLPLEGELLIQWGNGMQSQCRAHYSLPEKSLQQAITLKGIRCE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fim2D | AFH78429.1 | putative fimbrial usher protein | Virulence | KpGI-5 | Protein | 3e-179 | 51 |
| sfaF | CAC16953.2 | SfaF protein | Virulence | PAI III 536 | Protein | 5e-177 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fimD | YP_004950907.1 | outer membrane usher protein fimD | VFG0446 | Protein | 0.0 | 74 |
| fimD | YP_004950907.1 | outer membrane usher protein fimD | VFG1645 | Protein | 3e-177 | 48 |
| fimD | YP_004950907.1 | outer membrane usher protein fimD | VFG0912 | Protein | 2e-176 | 48 |
| fimD | YP_004950907.1 | outer membrane usher protein fimD | VFG0876 | Protein | 6e-177 | 48 |
| fimD | YP_004950907.1 | outer membrane usher protein fimD | VFG0454 | Protein | 8e-155 | 43 |
