Gene Information

Name : FCOL_03640 (FCOL_03640)
Accession : YP_004941361.1
Strain : Flavobacterium columnare ATCC 49512
Genome accession: NC_016510
Putative virulence/resistance : Virulence
Product : UDP-N-acetyl-D-galactosamine dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 858944 - 860248 bp
Length : 1305 bp
Strand : +
Note : COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase

DNA sequence :
ATGGTATTGCGAAAATTTAAAAATAAATTAATGATCAAAATAGGTGTAATCGGATTGGGGTATGTAGGGTTGCCATTAGC
TAGATTGTTGGCAACTAAATACGCAGTAGTTGGTTTTGATATAAATCAATTCCGTATAGTAGGTTTAAATGAAGGAAATG
ATGCTACGTTAGAAGTAAGTTCAAAATTACTAAAAGAGGTATTAAAGCCAATGAATGATAACTCCAATGGATTATTTTGT
TCTTGCGATTTAAATAACTTAATAGATTGTAACTACTTTATAGTTACTGTGCCAACACCTGTTGATAAACACAATAAGCC
CGACTTAGCCCCTTTGTACAAGGCAAGCGAAACAGTAGGAAAAGTATTGAAAAAAGGAGATATAGTTATCTATGAATCTA
CTGTTTACCCAGGAGCTACTGAAGAAGAATGTGTTCCTGTTTTAGAAAAAATAAGCAACCTCAAATTTAATGTTGATTTT
TTTGTGGGCTATTCCCCAGAGCGAATCAATCCAGGTGATAAAGAACATACGGTAGAAAAGATATTAAAAGTAACCTCAGG
ATCTACACCTGAAATAGGGCAAAAGGTGGATGCACTTTATAGCTCCGTTATTACAGCAGGTACACATTTAGCTCCTACTA
TTAAAGTAGCTGAAGCGGCTAAGGTCATAGAAAATTCACAACGGGATATCAATATAGCCTTCGTAAATGAATTGGCTAAG
ATCTTTAATTTGTTAAATATTGATACACAAGCTGTGCTTGAAGCCGCAGCAACAAAATGGAACTTTTTGTCTTTTAAGCC
CGGTTTGGTTGGAGGGCATTGTATAGGAGTAGATCCTTATTATTTAGCTCAAAAAGCACAAGAAAAAGGATACCACCCAG
AAATAATTTTAGCAGGACGGCGTTTGAATGATAGTATGGGAGAATACGTAGCATCGCAAGTAGTTAAATTAATGATAAAA
AAAGGAATTTCAGTCAATGGATCTAAAGTTTTGATGCTTGGGATTACATTTAAAGAAAACTGCCCTGATGTTCGTAATAC
AAAGATTGTAGATATGATTGCTGCTTTAAAAGATTATGGAATAGAAGTGGTTATTTATGATCCTTGGGTTAGTATTGAAG
AAGTTAAAGATGAGTATAATCTAAAAGCATTAACAGAATTGCCTTCCGATAGATTTGATGGAGTTGTTTTAGGAGTAGCT
CATCACCAATTTTTAAATCTGGATTTTGCTAGTTTGCAAAAAGAAAAATCAATTATTTATGATGTAAAAGGAATATTACA
TTGTAAAGTGGATGGAAAATTGTAA

Protein sequence :
MVLRKFKNKLMIKIGVIGLGYVGLPLARLLATKYAVVGFDINQFRIVGLNEGNDATLEVSSKLLKEVLKPMNDNSNGLFC
SCDLNNLIDCNYFIVTVPTPVDKHNKPDLAPLYKASETVGKVLKKGDIVIYESTVYPGATEEECVPVLEKISNLKFNVDF
FVGYSPERINPGDKEHTVEKILKVTSGSTPEIGQKVDALYSSVITAGTHLAPTIKVAEAAKVIENSQRDINIAFVNELAK
IFNLLNIDTQAVLEAAATKWNFLSFKPGLVGGHCIGVDPYYLAQKAQEKGYHPEIILAGRRLNDSMGEYVASQVVKLMIK
KGISVNGSKVLMLGITFKENCPDVRNTKIVDMIAALKDYGIEVVIYDPWVSIEEVKDEYNLKALTELPSDRFDGVVLGVA
HHQFLNLDFASLQKEKSIIYDVKGILHCKVDGKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 2e-115 58
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 2e-115 58
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 6e-105 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FCOL_03640 YP_004941361.1 UDP-N-acetyl-D-galactosamine dehydrogenase VFG0431 Protein 7e-116 58