Gene Information

Name : FCOL_03635 (FCOL_03635)
Accession : YP_004941360.1
Strain : Flavobacterium columnare ATCC 49512
Genome accession: NC_016510
Putative virulence/resistance : Virulence
Product : UDP-N-acetylglucosamine C4 epimerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 858003 - 858974 bp
Length : 972 bp
Strand : +
Note : COG0451 Nucleoside-diphosphate-sugar epimerases

DNA sequence : 
ATGAAGATTGTAATTACTGGTTGTGCAGGTTTTATAGGCTCTAATCTAACAGAGCATTTTTTAAATAAAGGTTATCAGCT
AGTTGGTTTGGATAATTTGGCAACAGGACATTTGAAAAATATCCAAGATTTTATGTTAAATAAGAATTTTCAATTCGTTA
AAGGCGATATCAGAGATATTGAAATATGTAAAAAAGTATGCGATGGCGCTGATTATGTATTACACCAAGCAGCTTTAGGA
TCTGTTCCTCGCTCTATAAAGGATCCCTTAACATCTAACGATGTAAATGTGAATGGCTTTTTAAATATGTTATGGGCTGC
TAAGGAAGCAGGTGTAAAACGTTTTGTTTACGCAGCAAGTTCATCTACTTACGGAGATTCGGAAAGTTTACCAAAAATCG
AAGAAGTTATAGGGAAACCATTATCACCGTATGCCATTACAAAATATGTAAATGAACTTTATGCCGATATTTTTGGAAAA
ATCTACGGGATAGAAACAATAGGTTTACGTTATTTTAATGTATTTGGGAGAAAACAAGACCCAAATGGAGCTTATGCCGC
TGTGATACCTAAATTTGTAATGCAATTTATGAAGTATGAAAGTCCTGTGGTAAATGGAGACGGTAATTATTCTAGAGATT
TTACCTATATAGACAATGTAATTCAAATGAATGAACTGGCTATGTTAACTCAAGATTCTAGAGCCATAAATACAGTTTTT
AATACAGCGTTTGGAGAACGTACAACATTAAATCAGATGATTTCTATTTTGCAAAAAGAATTAGTGAAAATAGATTCTAA
AATAGCAGATGTTAAAGTTGTGTATGGATCCACAAGAGCAGGTGATATTCCTCATTCTTTAGCATCTATAGATAAAGCAA
AAAAAATACTAGGATATGCTCCTAAATTTTCTTTGCAAAAAGGATTAGAGGAAGCGATTAAATGGTATTGCGAAAATTTA
AAAATAAATTAA

Protein sequence : 
MKIVITGCAGFIGSNLTEHFLNKGYQLVGLDNLATGHLKNIQDFMLNKNFQFVKGDIRDIEICKKVCDGADYVLHQAALG
SVPRSIKDPLTSNDVNVNGFLNMLWAAKEAGVKRFVYAASSSTYGDSESLPKIEEVIGKPLSPYAITKYVNELYADIFGK
IYGIETIGLRYFNVFGRKQDPNGAYAAVIPKFVMQFMKYESPVVNGDGNYSRDFTYIDNVIQMNELAMLTQDSRAINTVF
NTAFGERTTLNQMISILQKELVKIDSKIADVKVVYGSTRAGDIPHSLASIDKAKKILGYAPKFSLQKGLEEAIKWYCENL
KIN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 7e-75 52
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 7e-75 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FCOL_03635 YP_004941360.1 UDP-N-acetylglucosamine C4 epimerase VFG0430 Protein 3e-75 52