Gene Information

Name : FCOL_02680 (FCOL_02680)
Accession : YP_004941174.1
Strain : Flavobacterium columnare ATCC 49512
Genome accession: NC_016510
Putative virulence/resistance : Virulence
Product : thiol peroxidase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 621631 - 622128 bp
Length : 498 bp
Strand : -
Note : COG2077 Peroxiredoxin

DNA sequence : 
ATGGGACAGATAACATTTAAAGGAAATACGATAAATACAGTTGGAGAATTGCCTGTAGTAGGATCAGTGGCAAAAGCGTT
TGAATTAGTAGCAACGGATTTATCTGTAAAAACATTAGAAGATTTTAAAGGGCAAAAACTAGTGTTAAATATTTTTCCTA
GTATAGATACTGGAATTTGTGCGGCTTCTGTTCGAAAATTTAATGAAACAGCATCTACTTTAGAAAACACAAAAGTATTG
TGTATTTCTAGAGATTTACCATTTGCACAAACTCGTTTTTGTGGAGCAGAAGGGTTAGATAACGTTATTAACCTTTCGGA
TTTTAAAACAGGTAGTTTTGGGGCTGATTATGGTTTGACTATAGTAGAAGGACCTTTGGCAGGTTTGCATTCACGTTGTG
TAATTGTATTGGATGAAAACGGAGTTGTAAAATATACAGAGCAAGTAGCAGAAATTGCTCAAGAACCTAATTATGAATCT
GCTTTAGCTTCTTTATAA

Protein sequence : 
MGQITFKGNTINTVGELPVVGSVAKAFELVATDLSVKTLEDFKGQKLVLNIFPSIDTGICAASVRKFNETASTLENTKVL
CISRDLPFAQTRFCGAEGLDNVINLSDFKTGSFGADYGLTIVEGPLAGLHSRCVIVLDENGVVKYTEQVAEIAQEPNYES
ALASL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 1e-30 44
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 1e-30 44
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 7e-31 44
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 2e-30 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FCOL_02680 YP_004941174.1 thiol peroxidase VFG0087 Protein 3e-31 44