Gene Information

Name : FCOL_01945 (FCOL_01945)
Accession : YP_004941031.1
Strain : Flavobacterium columnare ATCC 49512
Genome accession: NC_016510
Putative virulence/resistance : Unknown
Product : putative IS3 family transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 451432 - 452346 bp
Length : 915 bp
Strand : -
Note : COG2801 Transposase and inactivated derivatives

DNA sequence :
ATGCCTGCCGAAAAGCGCGAGCTTGTTATCTATGTTGGGAAGCGATTTAAAATGAGCTTTCGTCAGGCGTGTAAGCTGTT
TCGTATAAGTACTTCTGTGTTTTATTATAAGTCCAAACGAAAAAATTGCGACCTTCAAATTTCCGAAGAGTTATTAAAAT
TGGCTGAATCTCATCGTACTTGGGGTTTTTGGATGATGTATAACCGATTGAGAAATTTAGATTATCTATGGAATCATAAA
CGAGTATACCGGATTTATACAGAAATGCGGCTAAATTTAAGATGTAAGCGTAAGAAAAGAATTCCCGCAAGAATAAAGGA
GCCTTTACTCAGACCAATTCAACCTAATATCACATGGAGTATTGATTTTATGCAGGATACGCTACAAGATGGGAGGAAAA
TTCGTTCTCTTAATGTCATAGATGATTTTAATAGGGAAGCATTAATGGTTACTGTCAACAACAGCTTGCCTGCTCAAAGG
GTGATTAATGAATTAGACAATTTAATCCAATGGAGGGGTAAACCAGAGCGAATTCGAGTAGATAATGGTCCCGAATTTAT
CGCACAAAAGATGAATGATTGGTGCCAAAATAATCAAATAGAATTAACCTATATTCAACCTGGAAAACCTACCCAAAACA
GTTTGATTGAGCGTTTTAATAGAACATTTCGACAGGAAGTATTGGATTGTTATATGTTTGAATCAACCCGCCAAATGCAG
AATTATGTAAACGCATGGATATGGATTTATAATAATGAAAGACCTCATTCTGGGCTGAATTATATGACGCCTATAGGGTT
CTTGTTGAAATATGGGAAACTCAACTTTGAAACCGCCGAAGAGTTTCCCATATTTCAACAAGAGAAATTTAAAATTATTG
ATTGGATTTCTTTAGTTTTGAATGTAGCTAATTGA

Protein sequence :
MPAEKRELVIYVGKRFKMSFRQACKLFRISTSVFYYKSKRKNCDLQISEELLKLAESHRTWGFWMMYNRLRNLDYLWNHK
RVYRIYTEMRLNLRCKRKKRIPARIKEPLLRPIQPNITWSIDFMQDTLQDGRKIRSLNVIDDFNREALMVTVNNSLPAQR
VINELDNLIQWRGKPERIRVDNGPEFIAQKMNDWCQNNQIELTYIQPGKPTQNSLIERFNRTFRQEVLDCYMFESTRQMQ
NYVNAWIWIYNNERPHSGLNYMTPIGFLLKYGKLNFETAEEFPIFQQEKFKIIDWISLVLNVAN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 2e-55 45