Gene Information

Name : FCOL_13125 (FCOL_13125)
Accession : YP_004943213.1
Strain : Flavobacterium columnare ATCC 49512
Genome accession: NC_016510
Putative virulence/resistance : Resistance
Product : Cys/Met metabolism PLP-dependent enzyme
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3068799 - 3069947 bp
Length : 1149 bp
Strand : +
Note : COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases

DNA sequence : 
ATGAAATTTAATACAAAAACCATACATGGTGGTCAACAACATGACCCCAGTACAGGGGCTGTTATGCCTCCTGTTTATAA
TACCTCTACTTTTGCACAACATGATCCAGGTGTTCCAAATAACGGATATGAATACAGTAGAGCAGCAAATCCTACTCGTA
CAGCCTTAGAAAATGCTTTGGCAAGTATAGAAAACGGAACACGTGGATTAGCTTTTTCTTCTGGTTTAGCAGCTACTGAC
TGTGTTTTAAGAGGGTTAAAAGCAGGAGATGAAGTAATTGCTATGGATGATTTATACGGTGGAACCTATCGTATGTTTAC
CCGTATTTATAAAGAGTCAGGTATCAAGTTTCATTTTGTAGATATGAATGATCTACCAAAATTCGAATCATTAATTAATG
AAAATACTCGTTTAGTTTGGGTAGAAACGCCTACTAATCCATTAATGAAATTAGCTGATATTAAGGCTGTTGCAGGTATA
ATTAAAAAGTATTCTAATATTCTTTTTGCTGTTGATAATACATTTGCAACACCTTATTTGCAAAAGCCACTCGATTTAGG
AGCGGATATCGTAATGCATTCAGCTACTAAATATCTAGGAGGGCATTCTGATGTAATTGCTGGAGCTTTGATCGTAAAAG
ATGAAGCGTTAGGAAACCAATTGCATTTTCAACAATTTGCTACAGGAGCTACTTTAGGCCCCAATGATTCATTTTTAGTT
TTAAGAGGAATTAAAACATTGCATTTGCGCGTTCAACGTCACTGTGAAAATGGGGTTAAAGTTGCTGAATTTTTAGTAAA
TCATCCCAAAGTTGAAAAAGTATATTATCCAGGTTTAGAAAACCATCCTTTTCATGAAGTAGCAAAAAAACAAATGATAG
GAGGCTTTGGAGGAATGGTAACTTTTACATTCAAATCAGGCGCTAAGCAAGATGCTGTTGATTTCTTAAAGAAATTAAAA
GTGTTTACTTTGGCAGAATCTTTAGGAGGTGTAGAATCATTGGCCAATCATCCAGCTCTCATGACACACGCTTCAATACC
AGAAGATAAAAGAAAAGAAATAGGTATATCAGACGATTTAGTACGTTTGAGTGTGGGTGTTGAAGATATTCAAGATTTGA
TAGAAGATTTGCAACAAGCATTAGCCTAA

Protein sequence : 
MKFNTKTIHGGQQHDPSTGAVMPPVYNTSTFAQHDPGVPNNGYEYSRAANPTRTALENALASIENGTRGLAFSSGLAATD
CVLRGLKAGDEVIAMDDLYGGTYRMFTRIYKESGIKFHFVDMNDLPKFESLINENTRLVWVETPTNPLMKLADIKAVAGI
IKKYSNILFAVDNTFATPYLQKPLDLGADIVMHSATKYLGGHSDVIAGALIVKDEALGNQLHFQQFATGATLGPNDSFLV
LRGIKTLHLRVQRHCENGVKVAEFLVNHPKVEKVYYPGLENHPFHEVAKKQMIGGFGGMVTFTFKSGAKQDAVDFLKKLK
VFTLAESLGGVESLANHPALMTHASIPEDKRKEIGISDDLVRLSVGVEDIQDLIEDLQQALA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-81 49
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-82 49
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 1e-63 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FCOL_13125 YP_004943213.1 Cys/Met metabolism PLP-dependent enzyme BAC0207 Protein 4e-73 46