Gene Information

Name : FCOL_12790 (FCOL_12790)
Accession : YP_004943146.1
Strain : Flavobacterium columnare ATCC 49512
Genome accession: NC_016510
Putative virulence/resistance : Unknown
Product : putative IS3 family transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2995574 - 2996488 bp
Length : 915 bp
Strand : +
Note : COG2801 Transposase and inactivated derivatives

DNA sequence :
ATGCCTGCCGAAAAGCGCGAGCTTGTTATCTATCTTGGGAAGCGATTTAAAATGAGCTTTCGTCAGGCGTGTAAGCTGTT
TCGTATAAGTACTTCTGTGTTTTATTATAAGTCCAAACGAAAAAATTGCGACCTTCAAATTTCCGAAGAGTTATTAAAAT
TGGCTGAATCTCATCGTACTTGGGTTTTTTGGATGATGTATAACCGTTTGAGAAATTTAGATTATCTATGGAATCATAAA
CGAGTTTATAGGATTTATACAGAAATGCGGCTAAATTTAAGATGTAAGCGTAAGAAAAGAATTCCCGCAAGAATAAAGGA
GCCTTTACTCAGACCAATTCAACCTAATATCACATGGAGTATTGATTTTATGCAGGATACGCTACAAGATGGGAGGAAAA
TTCGTTCTCTTAATGTCATAGATGATTTTAATAGGGAAGCATTAATGGTTACTATCAACAACAGCTTGCCTGCTCAAAGG
GTGATTAATGAATTAGACAATTTAATCCAATGGAGGGGTAAACCAGAGCGAATTCGCGTAGATAATGGTCCCGAATTTAT
TGCACAAAAGATGAAGGATTGGTGCCAAAATAATCAAATAGAATTAACCTATATTCAACCTGGAAAACCTACCCAAAACA
GTTTGATTGAGCGTTTTAATAGAACATTTCGACAGGAAGTATTGGATTGTTATATGTTTGAATCAACCCGCCAAATGCAG
AATTATGTAAACGCATGGATATGGATTTATAATAATGAAAGACCTCATTCTGGGCTGAATTATATGACGCCTATAGGGTT
CTTGTTGAAATATGGGAAACTCAACTTTGAAACCGCCGAAGAGTTTCCCACATTTCAACAAGAGAAATTTAAAATTATTG
ATTGGAATTCTTTAGTTTTGAATGTAGCTAATTGA

Protein sequence :
MPAEKRELVIYLGKRFKMSFRQACKLFRISTSVFYYKSKRKNCDLQISEELLKLAESHRTWVFWMMYNRLRNLDYLWNHK
RVYRIYTEMRLNLRCKRKKRIPARIKEPLLRPIQPNITWSIDFMQDTLQDGRKIRSLNVIDDFNREALMVTINNSLPAQR
VINELDNLIQWRGKPERIRVDNGPEFIAQKMKDWCQNNQIELTYIQPGKPTQNSLIERFNRTFRQEVLDCYMFESTRQMQ
NYVNAWIWIYNNERPHSGLNYMTPIGFLLKYGKLNFETAEEFPTFQQEKFKIIDWNSLVLNVAN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 4e-55 45