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Name : FCOL_09925 (FCOL_09925) Accession : YP_004942587.1 Strain : Flavobacterium columnare ATCC 49512 Genome accession: NC_016510 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : - COG ID : - EC number : - Position : 2336351 - 2337757 bp Length : 1407 bp Strand : + Note : COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB DNA sequence : ATGGACAATATATTAGATGTTAATCCAGAAAATATTTTGGCTATTTCTAGTGAGTTAGCCAATCATTATCGTATTATCCC AAAACAAGTAGATAATGATTTTTTACAATTATATATTGATACTTTATACAAAAACTCAAATACTCAAGAGGAACTTGAAC TTTTAACAGGTAAAAACATTAAACTATTTGAAGCAAACACTAATATAATTGAAAAGGCATTGTCTATTCATTATCGTAAA GAACGTATTGATACTAAAAAAAAGAATTTTGATGTTGAAAAACAGGATTTTCTAGAATCGTTACTAGAAGAAGCAAAAGT ATTAAAAAGCAGTGATATTCATTTTGAAGTTTATGAAGATAATGCTCGAATTCGTTTACGTATTGATGGTCAGCTTATTG AACGGTATAAAATTCAAAAGGATAATTATCTTGAGTTGGTGAATAAAGTAAAAATAAAGGCTAAACTTAATATCACTGAA AAAAGATTGCCGCAAGACGGGCGTATTACCAATGAAGCTTTTGATATAAGGGTGTCCATTTTGCCAACACTTTTTGGCGA AAAGATAGTGATGCGTTTATTAGGGCAAGATGCTTCAAATATTGATTTAAATGCTTTAGGTTTTAAAAACGATGAATTAG AAAAGTACCTTCAAGCCGTAAAGAAGCCCAATGGTATTATTTTAATAAGTGGTCCCACTGGTTCAGGAAAAACGACTACT CTGTATGCTACTTTAAAATTATTAAATGACAGTAAGCGTAATATTGTTACCGTAGAAGACCCGATAGAATACACTCTCAA AGGAATCAATCAAGTACAACTCAAAGAAGATATTGGGCTTACTTTTGCTTCTGCTTTGAAATTCTTTTTACGACAAGATC CAGATGTGATTATGTTGGGAGAAATTAGGGATTCAGAAACGGCACTTATGGCTATTAGGGCTTCACTGACAGGACACCTA GTTTTATCAACTATCCATACAAATTCTGCTATTGGTACCATGTCGCGTTTAATTGATATGGGCGTTCCTGCCTACTTAAT CTCTGAAACCTTAAATTTATCAGTAGCACAACGATTGGTCAGAAAACTTTGTGAAAATTGTAAGCAAGAAGTAAGTGTTG ATAAAGAGGATTTTCCCATGAGTTTTCATTTTCCATATCCGCTTGAAAAACACTTTAAAACGTGTGGATGTAATCAATGT TTTCACACTGGATACAAAGGTAGAACAGCTATCTATGAAGTAATTCATGTAGATAACAAATTAGCAGCAGCTATAAAGCA CAATAATATAGTTGAAATTTTTGAAAACGACAAGGTTCACCAAACCTTAGCTCATAAAGCTTTCGATCTCTTAGCAAAAG GAGAAACCTCATTAGATGAAATTTATCCAATTTTAATTGCACAATAA Protein sequence : MDNILDVNPENILAISSELANHYRIIPKQVDNDFLQLYIDTLYKNSNTQEELELLTGKNIKLFEANTNIIEKALSIHYRK ERIDTKKKNFDVEKQDFLESLLEEAKVLKSSDIHFEVYEDNARIRLRIDGQLIERYKIQKDNYLELVNKVKIKAKLNITE KRLPQDGRITNEAFDIRVSILPTLFGEKIVMRLLGQDASNIDLNALGFKNDELEKYLQAVKKPNGIILISGPTGSGKTTT LYATLKLLNDSKRNIVTVEDPIEYTLKGINQVQLKEDIGLTFASALKFFLRQDPDVIMLGEIRDSETALMAIRASLTGHL VLSTIHTNSAIGTMSRLIDMGVPAYLISETLNLSVAQRLVRKLCENCKQEVSVDKEDFPMSFHFPYPLEKHFKTCGCNQC FHTGYKGRTAIYEVIHVDNKLAAAIKHNNIVEIFENDKVHQTLAHKAFDLLAKGETSLDEIYPILIAQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-68 | 45 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-68 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| FCOL_09925 | YP_004942587.1 | type II secretion system protein E | VFG1876 | Protein | 2e-72 | 47 |
| FCOL_09925 | YP_004942587.1 | type II secretion system protein E | VFG2048 | Protein | 2e-68 | 45 |
| FCOL_09925 | YP_004942587.1 | type II secretion system protein E | VFG2426 | Protein | 2e-60 | 42 |
