Gene Information

Name : FCOL_09540 (FCOL_09540)
Accession : YP_004942510.1
Strain : Flavobacterium columnare ATCC 49512
Genome accession: NC_016510
Putative virulence/resistance : Unknown
Product : putative IS3 family transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2233493 - 2234407 bp
Length : 915 bp
Strand : -
Note : COG2801 Transposase and inactivated derivatives

DNA sequence :
ATGCCTGCCGAAAAGCGCGAGCTTGTTATCTATGTTGGGAAGCGATTTAAAATGAGCTTTCGTCAGGCGTGTAAGCTGTT
TCGTATAAGTACTTCTGTGTTTTATTATAAGTCCAAACGAAAAAATTGCGACCTTCAAATTTCCGAAGAGTTATTAAAAT
TGGCTGAATCTCATCGTACTTGGGTTTTTTGGATGATGTATAACCGTTTGAGAAATTTAGATTATCTATGGAATCATAAA
CGAGTTTATAGGATTTATACAGAAATGCGGCTAAATTTAAGATGTAAGCGTAAGAAAAGAATTCCCGCAAGAATAAAGGA
GCCTTTACTCAGACCAATTCAACCTAATATCACATGGAGTATTGATTTTATGCAGGATACGCTACAAGATGGGAGGAAAA
TTCGTTCTCTTAATGTTATAGATGATTTTAATAGGGAAGCATTAATGGTTACTATCAACAACAGCTTGCCTGCTCAAAGG
GTGATTAATGAATTAGACAATTTAATCCAATGGAGGGGTAAACCAGAGCGAATTCGCGTAGATAATGGTCCCGAATTTAT
TGCACAAAAGATGAAGGATTGGTGCCAAAATAATCAAATAGAATTAACCTATATTCAACCTGAAAAACCTACCCAAAACA
GTTTGATTGAGCGTTTTAATAGAACATTTCGACAGGAAGTATTGGATTGTTATATGTTTGAATCAACCCGCCAAATGCAG
AATTATGTAAACGCATGGATATGGATTTATAATAATGAAAGACCTCATTCTGGGCTGAATTATATAACGCCTATAGGGTT
CTTGTTGAAATATGGGAAACTCAACTTTGAAACCGCCGAAGAGTTTCCCACATTTCAACAAGAGAAATTTAAAATTATTG
ATTGGAATTCTTTAGTTTTGAATGTAGCTAATTGA

Protein sequence :
MPAEKRELVIYVGKRFKMSFRQACKLFRISTSVFYYKSKRKNCDLQISEELLKLAESHRTWVFWMMYNRLRNLDYLWNHK
RVYRIYTEMRLNLRCKRKKRIPARIKEPLLRPIQPNITWSIDFMQDTLQDGRKIRSLNVIDDFNREALMVTINNSLPAQR
VINELDNLIQWRGKPERIRVDNGPEFIAQKMKDWCQNNQIELTYIQPEKPTQNSLIERFNRTFRQEVLDCYMFESTRQMQ
NYVNAWIWIYNNERPHSGLNYITPIGFLLKYGKLNFETAEEFPTFQQEKFKIIDWNSLVLNVAN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 5e-54 44