|
Name : FCOL_08695 (FCOL_08695) Accession : YP_004942345.1 Strain : Flavobacterium columnare ATCC 49512 Genome accession: NC_016510 Putative virulence/resistance : Unknown Product : putative RNA binding protein with S1 RNA-binding domain Function : - COG functional category : - COG ID : - EC number : - Position : 2016451 - 2018574 bp Length : 2124 bp Strand : - Note : COG2183 Transcriptional accessory protein DNA sequence : ATGACAAATATTGACTTTATCCTAAAAGGAGTCCAAACGACTCCCAAAAATATCCAAAATACACTTGAATTACTTTCGCA AGATTGTACAATTCCTTTCATAGCACGTTATCGAAAGGATACCACAGGAAATTTAGATGAGGTAGTTATAGAACAAATAG CCAAACTAAACAAACAATATGATGAAATTATAAAACGTAAAGAAAGTGTTTTAAAATCAATAGAAGAACAAAATGCTCTT ATACCAGAACTAAAATCAAAAATTGAAAACAGTTTTGATTTACAAGAAATAGAAGATTTATACCTTCCTTACAAAAAGAA AAAGAAAACTAAGGCAGATACCGCCCGTGAAAACGGATTAGAACCTTTGGCAAAAATAATTATGTCGCAGCGTAACGATG ATATTGAATTTTTAGCATCTAAATATATTAATGATAAGGTAACTAACGAAGAGGAAGCCTTACAAGGAGCTCGTGATATT ATAGCAGAATGGGTTAATGAGAATATTTTTATTCGTAAAAATTTACGTAGAATGTTTCAGCGAAAAGCTGAAATTACAAC TAAAGTAGTGAAAGCTAAAAAAGACGATCAAGAAGCTCAAAAGTATAATCAATATTTCGAATGGGCTGAACCCATTAGTA AAGCACCTTCGCACCGATTGTTAGCCATGCTAAGAGCGGAAGCAGAAGGTTTTGTTAAATTGAATGTAGAAATTGAAAAA GAAGAAGCTGTTAGTTTTATTGAAGATAACATTATTAAATCAAAAAATGATACAACATTACATATTCAATTAGCTATTAA AGATTCTTATAAACGATTGTTAGAACCTGCTATTTCTAATGAAACGTTACAAGAAGCCAAAGAAAAAGCTGATATTAAAG CAATTGATGTTTTTGCGAGTAATTTAAGTCAGTTATTATTGGCTCCACCTTTAGGTGAAAAACGAATTTTAGCTATTGAC CCCGGATTTAGAACGGGATGTAAAGTGGTTTGTCTGGATGAAAAAGGTGATTTGCTATACAATGAAACCATTTTTCCGCA CGCACCGCAAAATGAAACGACTATGGCAATGAAAAAAATAAAATCGATGGTGAATGCTTATAATATTGAAGCCATTTCTA TAGGCAACGGAACAGCGAGTCGTGAAACCGAATTTTTCATCAAGAAAATTGCTTTTGATAAACCAGTCCAGGTTTTTGTA GTTTCAGAAGCTGGAGCGTCAGTCTATTCGGCATCTAAAATTGCGAGAGATGAATTTCCTAATTATGATGTGACGGTTCG TGGTGCCGTTTCTATTGGGCGCCGTTTATCTGATCCCTTAGCCGAATTGGTTAAAATTGACCCAAAATCTATTGGTGTAG GGCAGTACCAACACGATGTGGACCAAACCAAGTTAAATTCAGCATTGGATACCACGGTAGTACGTTGCGTAAACTCGGTT GGGATTAATATTAACACGGCGAGTAAATCATTGTTGAGCTATGTTTCAGGAATTGGCGAAAAAATGGCTGAAAACATTGT GGCGTATCGTAGTGAAAATGGGGCTTTTGAAGACCGTAGCCAACTGAAAAAAGTGCCGCGATTAGGAGATAAAGCGTTCC AACAGGCAGCGGCATTTATTAGAATCAAAGACGGTAAAAACCCGTTGGATAATTCGGCCGTGCATCCTGAATCGTATAAA ATGGTCGAGAAAATGGCTAAAGATTTGGGTGTTAAAGTCAATGAATTAATCGGGAATAAGGAAAAAATCAGTCAAATCAA ACCAGAGAATTATATTACTGAAAACGTGGGTATTTTAGGTATCAAAGATATTTTAAAAGAATTGGAAAAACCAGGACTAG ACCCACGTAAAGCGGCCAAAGTTTTTGAATTCGACCCGAATGTAAAAACCATTGCTGATGTTCGTAGCGGAATGATTTTG CCAGGTATTGTAAATAATATCACCGCATTTGGTTGTTTTGTTGACATTGGAATCAAAGAAAGCGGACTCGTACATATTTC CCAACTCAAAGAAGGCTATGTTGCCGATGTGAATGAAGTGGTAAAACTCCACCAACACGTGCAAGTAAAAGTCGTTGAGG TAGATGAAGCCAGAAAAAGAATTCAGTTGACGATGATATTGTAA Protein sequence : MTNIDFILKGVQTTPKNIQNTLELLSQDCTIPFIARYRKDTTGNLDEVVIEQIAKLNKQYDEIIKRKESVLKSIEEQNAL IPELKSKIENSFDLQEIEDLYLPYKKKKKTKADTARENGLEPLAKIIMSQRNDDIEFLASKYINDKVTNEEEALQGARDI IAEWVNENIFIRKNLRRMFQRKAEITTKVVKAKKDDQEAQKYNQYFEWAEPISKAPSHRLLAMLRAEAEGFVKLNVEIEK EEAVSFIEDNIIKSKNDTTLHIQLAIKDSYKRLLEPAISNETLQEAKEKADIKAIDVFASNLSQLLLAPPLGEKRILAID PGFRTGCKVVCLDEKGDLLYNETIFPHAPQNETTMAMKKIKSMVNAYNIEAISIGNGTASRETEFFIKKIAFDKPVQVFV VSEAGASVYSASKIARDEFPNYDVTVRGAVSIGRRLSDPLAELVKIDPKSIGVGQYQHDVDQTKLNSALDTTVVRCVNSV GININTASKSLLSYVSGIGEKMAENIVAYRSENGAFEDRSQLKKVPRLGDKAFQQAAAFIRIKDGKNPLDNSAVHPESYK MVEKMAKDLGVKVNELIGNKEKISQIKPENYITENVGILGIKDILKELEKPGLDPRKAAKVFEFDPNVKTIADVRSGMIL PGIVNNITAFGCFVDIGIKESGLVHISQLKEGYVADVNEVVKLHQHVQVKVVEVDEARKRIQLTMIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 2e-138 | 46 |
