Gene Information

Name : smpB (FCOL_07625)
Accession : YP_004942137.1
Strain : Flavobacterium columnare ATCC 49512
Genome accession: NC_016510
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1764177 - 1764632 bp
Length : 456 bp
Strand : +
Note : COG0691 tmRNA-binding protein

DNA sequence :
ATGCAAAAAACAGTCAACATACTAAACAAAAGAGCCAGGTTTGATTACGAAATAATTGACAAGTACACGGCTGGAATAGT
ATTAACCGGTACTGAAATTAAATCCATCCGATTAGGAAAAGCTTCAATTGCTGAAAGCTTTTGTGAGTTTAATGGAAGTG
AGTTATTTGTTATTAATTCTACGATAGAAGAATATGCTTTTGGAACGCATTATAACCATAGAGCTAAAAGCGAACGAAAA
CTTCTTTTAAACAAAAAAGAATTAAGAGGACTTTTAAAGGATGTTCAAAACAAAGGCTTAACCATTATTCCTTTGCGCTT
ATTTACGAGTGAAAAAGGCCTCGCAAAATTAGATATTGCCTTATGTAGAGGTAAGAAGAATTATGACAAACGAGAAACCA
TAAAAGACCGTGACAACAAGCGTGATTTAGACAGAATTAAAAAAGCCTATAAATAA

Protein sequence :
MQKTVNILNKRARFDYEIIDKYTAGIVLTGTEIKSIRLGKASIAESFCEFNGSELFVINSTIEEYAFGTHYNHRAKSERK
LLLNKKELRGLLKDVQNKGLTIIPLRLFTSEKGLAKLDIALCRGKKNYDKRETIKDRDNKRDLDRIKKAYK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 3e-17 43