Gene Information

Name : FCOL_06880 (FCOL_06880)
Accession : YP_004941990.1
Strain : Flavobacterium columnare ATCC 49512
Genome accession: NC_016510
Putative virulence/resistance : Resistance
Product : phosphonate-transporting ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1603358 - 1604035 bp
Length : 678 bp
Strand : -
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGAATAATATTGTTTTAGAAACTAAAAAACTAACAAAATACTTTAATGATCCAGTACGTATGCAGGTTCTTAAAGAAAT
TGATTTACAAATAGAATACGGTCAATTCGTTTCTATTGTGGGAAAGTCAGGTTGTGGAAAATCCACATTATTGTATTTAC
TATCAACTATGGATACTGAATATGAAGGGCAAATTTTAATGGATAATCAGTTAATTACAGGCAAGACAGATAAAGAATTA
GCGCAAATTAGAAATGAAAAAATAGGATTTGTATTTCAGTTTCATTATCTGCTTAACGAATTTAGTGTGTTGCGAAATGT
AATGCTTCCAGGACTAAAATTAGCTAAACTCTCAGAAGAGGAAATCGAATATAATGCAATGGAATACTTGCGCACATTAG
AAATGCACGAACAAGCATTGAAGATGCCCAATCAATTAAGTGGTGGACAAAAACAACGAGTCGCAATTGCTAGAGCACTT
ATCAATAAACCTGTTATAATCATGGGTGATGAACCAACTGGTAACCTAGATAAAAAAAATAGCGATATCGTTTTTGATAT
TTTTAATCAATTAGCTAAAGAATTTAATCAAACCTTATTAATAGTAACACACGATCCTGATTTTGCTAATCGTACGCACC
GTATTATAACTATGGAGGATGGTAGAGTTATGATTTAA

Protein sequence : 
MNNIVLETKKLTKYFNDPVRMQVLKEIDLQIEYGQFVSIVGKSGCGKSTLLYLLSTMDTEYEGQILMDNQLITGKTDKEL
AQIRNEKIGFVFQFHYLLNEFSVLRNVMLPGLKLAKLSEEEIEYNAMEYLRTLEMHEQALKMPNQLSGGQKQRVAIARAL
INKPVIIMGDEPTGNLDKKNSDIVFDIFNQLAKEFNQTLLIVTHDPDFANRTHRIITMEDGRVMI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-31 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-31 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-31 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FCOL_06880 YP_004941990.1 phosphonate-transporting ATPase NC_012469.1.7686878. Protein 2e-37 45
FCOL_06880 YP_004941990.1 phosphonate-transporting ATPase NC_008702.1.4606598. Protein 4e-31 41