Gene Information

Name : FCOL_05300 (FCOL_05300)
Accession : YP_004941678.1
Strain : Flavobacterium columnare ATCC 49512
Genome accession: NC_016510
Putative virulence/resistance : Virulence
Product : Co-activator of prophage gene expression IbrB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1241010 - 1241513 bp
Length : 504 bp
Strand : -
Note : COG1475 Predicted transcriptional regulators

DNA sequence :
ATGAAAAGTCCTGTTTATAATGTGCTGGCTGTGCCAATAGAAAAAATACAAGCAAACAGCTATAACCCAAATAGTGTTGC
TTCTCCTGAAATGAAATTATTGTATCAATCGATAAAAGAAGACGGTTATACAATGCCTGTAGTTTGTTATTATTTGTCAG
AAAGTGATACTTACGAAATTGTAGATGGCTTTCATCGATATACAATTATGAAATCACATAAGGATATTTTTGACCGAGAA
AAGGGATGCTTACCTGTTGTGGTTATAGATAAAGATGTTACAAATAGAATGGCATCTACTATCAGGCATAATAGAGCACG
CGGATCTCATTCCATCGAATTAATGAGTAATATTGTTTCAGAACTTGTTAAAGCAGGAATGGGCGATGCTTGGATACTAA
AAAACATAGGTATGGATGCAGACGAACTATTAAGGCTGAAACAAGTTTCAGGACTTGCTGAATTATTCAAGAATAATAAT
TTTTCACTATCAAAAGAAAAATAA

Protein sequence :
MKSPVYNVLAVPIEKIQANSYNPNSVASPEMKLLYQSIKEDGYTMPVVCYYLSESDTYEIVDGFHRYTIMKSHKDIFDRE
KGCLPVVVIDKDVTNRMASTIRHNRARGSHSIELMSNIVSELVKAGMGDAWILKNIGMDADELLRLKQVSGLAELFKNNN
FSLSKEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
M5005_Spy_0164 YP_281528.1 parB-like nuclease Not tested Not named Protein 7e-52 66
ef0120 AAM75321.1 EF0120 Not tested Not named Protein 5e-34 58
EF0607 NP_814365.1 ParB-like nuclease domain-containing protein Not tested Not named Protein 8e-34 58
STY4584 NP_458668.1 conserved hypothetical protein Not tested SPI-7 Protein 2e-28 50
t4278 NP_807876.2 hypothetical protein Not tested SPI-7 Protein 2e-28 50
Z1644 AAQ19140.1 putative ParB-like nuclease Not tested PAI I CL3 Protein 3e-27 49
ibrB ADD91736.1 predicted transcriptional regulator IbrB Not tested PAI-I AL862 Protein 3e-27 49
Z1204 NP_286739.1 hypothetical protein Not tested TAI Protein 7e-27 49
Z1644 NP_287147.1 hypothetical protein Not tested TAI Protein 7e-27 49
z1204 CAD33764.1 Z1204 protein Not tested PAI I 536 Protein 1e-27 49
c5208 NP_757056.1 hypothetical protein Not tested PAI II CFT073 Protein 9e-18 44
APECO1_3503 YP_854305.1 hypothetical protein Not tested PAI I APEC-O1 Protein 9e-18 44
ORF_30 AAZ04440.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 6e-18 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FCOL_05300 YP_004941678.1 Co-activator of prophage gene expression IbrB VFG1505 Protein 5e-28 49