Gene Information

Name : FCOL_00525 (FCOL_00525)
Accession : YP_004940753.1
Strain : Flavobacterium columnare ATCC 49512
Genome accession: NC_016510
Putative virulence/resistance : Virulence
Product : ATPase with chaperone activity ATP-binding subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 120017 - 122563 bp
Length : 2547 bp
Strand : -
Note : COG0542 ATPases with chaperone activity, ATP-binding subunit

DNA sequence :
ATGGATGACAATTTTTCACCAAGAGTTAGAGAGGTAATTTCTTTTAGTAAAGAAGAGGCATTACGTTTAGGCCATGACTT
CATAGGCACTGAACACTTTATGCTTGGTATTTTAAGAGATGGTAATGGTTCCGCCATTCATATCTTAAACAATCTTTCTG
TTGACTTAGAACATCTACGTAGAAAAGTTGAAATACTAAGCCCAGCAAATCCTAATTTTATTTTAGGTAATGACAAAAAA
AACTTACATCTAACAAGACAAGCTGAAAGAGCTTTAAAAACTACTTTTTTAGAAGCTAAGGTTTTTCAAAGCACAACAAT
CAGTACGGCTCATTTACTTTTATGTATATTACGTAATGAAAACGATCCTACTACAAAATTATTGCACAAACTCAAAATTG
ATTACGATACAGCTAAAGAACAATATTTAACTATGATGCCAAACGAAGAAGATTTTCAAGACAATTTCCCAAAAAACGAA
TCGTCTTATGGTGATGATTCAAGACAAGATGACAGTTTTAATCAAAACAGCCCTTCTAATCCTGCCAACAAATCAAATAA
AAAATCAAAAACCCCTGTTTTAGATAATTTTGGACGTGATTTAACAGAAATGGCTGAAGAAGGCAAGCTAGATCCCGTTG
TCGGACGCGAAAAAGAAATAGAACGTGTTTCGCAAATTTTAAGCCGAAGAAAGAAAAACAACCCGCTACTAATAGGCGAA
CCAGGTGTTGGAAAGTCCGCTATTGCAGAAGGCTTAGCCCTAAGAATTGTACAAAAGAAAGTTTCTAGAATTTTATACAA
CAAAAGAGTTGTAACACTAGATCTTGCTTCATTGGTAGCAGGCACCAAATACCGCGGTCAATTTGAAGAACGTATGAAAG
CGGTTATGAATGAATTGGAAAAAAACAATGATATCATCCTATTTATTGATGAAATTCATACCATTGTGGGAGCAGGTGGC
GCAACAGGATCGCTTGATGCCTCTAATATGTTTAAACCAGCTTTAGCAAGAGGCGAAATACAATGTATAGGAGCTACAAC
ATTAGACGAATACCGCCAATATATAGAAAAAGATGGGGCATTAGAACGTCGTTTCCAAAAAGTAATTGTAGATCCAACAT
CTATTGAAGAAACAATTACAATTTTAAATAATATAAAAGGAAAATACGAAGATCACCACAATGTAAGTTTTACGCCTGAA
GCAATTCAAGCGTGCGTTAAGTTAACGGAGCGCTACATGAGTGATCGTTTTCTTCCAGATAAAGCTATTGATGCCTTAGA
CGAAGCTGGTTCTCGTGTACACATAACTAATATTCATGTTCCTCAACAAATCCTAGATTTAGAGCGTCAGCTGGATGAAG
TACGCGAATTAAAAAATACTGTAGTAAAACGCCAAAAGTACGAAGAAGCTGCCAAATTACGTGATGATGAAAAACGCATT
GAAAAAGAATTAGCAATAGCTCAAGAACAATGGGAAGAAGATTCTAAAAATAATAGAATAAGCGTTACAGAAGACAATGT
TGCCGATGTGGTGTCTATGATGACAGGTATTCCTGTAAATCGTATTGCTCAAACTGAAAGTAACAAATTAGCTCATTTAC
CTGAAATTCTAGACAAAAAAGTAATCGGCCAAAAAGATGCTGTTCAAAAAATTGCACGTGCCATTCAACGCAATCGAGCG
GGATTAAAAGACCCTAACAAACCAATAGGTTCATTTATTTTCTTAGGCTCAACAGGTGTTGGTAAAACCCAATTGGCAAA
AGTATTAGCAAAAGAATTATTTGATTCAGAAGAAGCTCTAGTTAGAGTTGATATGAGTGAATATATGGAAAAATTTGCCA
TCTCTCGTTTAGTCGGAGCTCCTCCAGGATATGTTGGTTATGAAGAAGGAGGACAATTAACCGAAAAAGTAAGACGCAAA
CCTTATTGTGTCGTTCTTTTAGACGAAATTGAAAAAGCGCATCCTGATGTTTTTAATATGATGTTGCAAGTGCTTGACGA
CGGGTATTTAACGGATAGCTTAGGTCGAAAAATTGACTTTAGAAACACAATTATCATTATGACTTCTAATGTAGGAGCTC
GACAGTTAAAAGACTTTGGTCAAGGCGTAGGTTTTGGTACAGCTGCCAAACAAGCACAAGCTGATGACCATGCAAAAGGA
GTTATTGAAAGCGCATTGAAAAAAACTTTTGCTCCTGAATTCTTAAACAGAATTGACGACGTTATTGTATTTAACGCCCT
TGAAAAAGAAGATATTGATAAAATCATTAATATTGAGTTGCAAAAATTATATGCTCGTATTAAGGAATTAGGATATGAAC
TCCGATTAACAGAAGAAACCAAGGCATTTATTGCCGAAAAAGGTTTTGATAAACAATTTGGTGCACGTCCATTAAAAAGA
GCTATCCAAAAATATATAGAAGACGCTCTAGCAGAAGAAATTATTACCTCTAAAATACATGAAGGAGATATAATTGAGAT
GGATTTAGACACTAGTTCACAAGAATTAAAAATTCAAGTAAAAAAATCTCAAAAGCCTACAGACTAG

Protein sequence :
MDDNFSPRVREVISFSKEEALRLGHDFIGTEHFMLGILRDGNGSAIHILNNLSVDLEHLRRKVEILSPANPNFILGNDKK
NLHLTRQAERALKTTFLEAKVFQSTTISTAHLLLCILRNENDPTTKLLHKLKIDYDTAKEQYLTMMPNEEDFQDNFPKNE
SSYGDDSRQDDSFNQNSPSNPANKSNKKSKTPVLDNFGRDLTEMAEEGKLDPVVGREKEIERVSQILSRRKKNNPLLIGE
PGVGKSAIAEGLALRIVQKKVSRILYNKRVVTLDLASLVAGTKYRGQFEERMKAVMNELEKNNDIILFIDEIHTIVGAGG
ATGSLDASNMFKPALARGEIQCIGATTLDEYRQYIEKDGALERRFQKVIVDPTSIEETITILNNIKGKYEDHHNVSFTPE
AIQACVKLTERYMSDRFLPDKAIDALDEAGSRVHITNIHVPQQILDLERQLDEVRELKNTVVKRQKYEEAAKLRDDEKRI
EKELAIAQEQWEEDSKNNRISVTEDNVADVVSMMTGIPVNRIAQTESNKLAHLPEILDKKVIGQKDAVQKIARAIQRNRA
GLKDPNKPIGSFIFLGSTGVGKTQLAKVLAKELFDSEEALVRVDMSEYMEKFAISRLVGAPPGYVGYEEGGQLTEKVRRK
PYCVVLLDEIEKAHPDVFNMMLQVLDDGYLTDSLGRKIDFRNTIIIMTSNVGARQLKDFGQGVGFGTAAKQAQADDHAKG
VIESALKKTFAPEFLNRIDDVIVFNALEKEDIDKIINIELQKLYARIKELGYELRLTEETKAFIAEKGFDKQFGARPLKR
AIQKYIEDALAEEIITSKIHEGDIIEMDLDTSSQELKIQVKKSQKPTD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FCOL_00525 YP_004940753.1 ATPase with chaperone activity ATP-binding subunit VFG0080 Protein 8e-148 53
FCOL_00525 YP_004940753.1 ATPase with chaperone activity ATP-binding subunit VFG0079 Protein 0.0 49