Gene Information

Name : tnpA (Vch1786_II0996)
Accession : YP_004939968.1
Strain :
Genome accession: NC_016446
Putative virulence/resistance : Unknown
Product : IS1004 transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1943
EC number : -
Position : 992600 - 993037 bp
Length : 438 bp
Strand : -
Note : -

DNA sequence :
ATGGGCGACTACAGAAGTTCATCACACGTCTATTGGCGTTGCAAATATCATATCGTTTGGACACCAAAATTTCGTTTTAA
GATCTTAAAAGGTAATGTTGCCAAAGAGCTAAATCGTTCGATCTACATTCTTTGTAATATGAAAGATTGTGAAGTTTTGG
AACTCAATGTTCAGCCAGATCATGTCCACTTAGTTGCGATAATTCCGCCCAAAGTATCGATTTCGACGTTGATGGGAGTT
TTAAAGGGTAGGAGTGCAATTAGGCTATTCAACAAGTTTCCACATATCAGGAAAAAGTTATGGGGAAATCATTTTTGGGC
GCGAGGCTATTTTGTGGATACGGTAGGTGTAAATGAAGAAATCATTAGACGGTATGTACGGCATCAAGACAAAAAAGAGC
TTGAGCAAGAGCAGCAGTTAGAGTTATTGAGAGACTAA

Protein sequence :
MGDYRSSSHVYWRCKYHIVWTPKFRFKILKGNVAKELNRSIYILCNMKDCEVLELNVQPDHVHLVAIIPPKVSISTLMGV
LKGRSAIRLFNKFPHIRKKLWGNHFWARGYFVDTVGVNEEIIRRYVRHQDKKELEQEQQLELLRD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SP_1064 NP_345538.1 IS200 family transposase Not tested PPI-1 Protein 7e-22 43
tnpA NP_455584.1 transposase for insertion sequence element is200 Not tested SPI-5 Protein 6e-23 42