Gene Information

Name : Vch1786_II0789 (Vch1786_II0789)
Accession : YP_004939761.1
Strain :
Genome accession: NC_016446
Putative virulence/resistance : Virulence
Product : two-component system, OmpR family, response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 762028 - 762861 bp
Length : 834 bp
Strand : -
Note : -

DNA sequence : 
ATGGCATTGATGCCAACTATTTCTACGGAGATTTTTTGCTACAAGAAGGCCGTAGCGCAGAGGCAAAGCGCTATTTACTG
CAAGCTCAGCATGCACCCGCAAGACCGAAACGAGAAATTGCGGATGCGGGACGTCAGGAAGAGATTGCGCACTTATTGGA
GAGCATCAAGTAACCTTATGCGTTTACTATTAGTTGAAGATGACACGTTGCTCGGTGAATCAATGCAAGTAGCGTTAAGC
CGACAAGGCTATACGGTTGACTGGCTGGAGCGGGGTGGTGGCGTCGTGACCGCCCTGAAAACCGAGCAATTTACGGCACT
GATTTTGGACCTCACCTTGCCAGATATGGATGGCTTGGAAGTCCTGCGCCAAATTCGGCGAGCGGGTTATACATTGCCTG
TCATGATACTCACGGCACGGGATGATATCAGTGATCGGGTCAAAGGGTTGGATGGCGGTGCAGATGAGTACATAGGTAAG
CCGTTTGCGCTCGAAGAGCTGCTCGCACGTTTACGCTTGATCATTCGTCGTAGCTCAGGGAGCGCAGAGGAGCTCATCTC
CGTTGGGGAACTTGACCTTTCGCTCTCTAAACAAGAAATCTACTACGCTCAGCAAGCTCTGAAATTAACGCGAAATGAGT
ACAAAATCCTCGCCAGTTTGATGACCCAAGCGGGAAGAGTGATGAGTAAAGAGCTTTTGCAGCAAGCACTGCACGGCTGG
GATGAAGGCAGCAGTGATAACGCAATCGAAGTACATATTCATAATCTGCGCAAAAAATTGCCGGATAATCTGGTTAAAAA
TGTACGAGGTGTGGGGTACATGATTGAAAAATAA

Protein sequence : 
MALMPTISTEIFCYKKAVAQRQSAIYCKLSMHPQDRNEKLRMRDVRKRLRTYWRASSNLMRLLLVEDDTLLGESMQVALS
RQGYTVDWLERGGGVVTALKTEQFTALILDLTLPDMDGLEVLRQIRRAGYTLPVMILTARDDISDRVKGLDGGADEYIGK
PFALEELLARLRLIIRRSSGSAEELISVGELDLSLSKQEIYYAQQALKLTRNEYKILASLMTQAGRVMSKELLQQALHGW
DEGSSDNAIEVHIHNLRKKLPDNLVKNVRGVGYMIEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 8e-32 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Vch1786_II0789 YP_004939761.1 two-component system, OmpR family, response regulator BAC0487 Protein 2e-35 45
Vch1786_II0789 YP_004939761.1 two-component system, OmpR family, response regulator BAC0083 Protein 2e-26 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Vch1786_II0789 YP_004939761.1 two-component system, OmpR family, response regulator VFG0473 Protein 8e-38 45