Gene Information

Name : Vch1786_II0221 (Vch1786_II0221)
Accession : YP_004939197.1
Strain :
Genome accession: NC_016446
Putative virulence/resistance : Unknown
Product : two-component system, OmpR family, KDP operon response regulator KdpE
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 171017 - 171709 bp
Length : 693 bp
Strand : +
Note : -

DNA sequence :
ATGAACAGTGAAATTAAGATCCTCATTATTGAAGACGAAGCGCCAATTCAACGGTTTTTGACTGTGCTTATTTCTGGTTA
TGAGTATCAAGTGAAAGTGGCCAGCACGGCAGAGCAAGGGCTGCATCTGGTGGCGAATTGGAATCCGCATTTGATCCTGT
TGGACTTAGGTTTGCCAGATCAAGACGGCATCAGTTTGACGAGAGAACTGCGAGCATGGACGCAAACCCCAATCATGGTG
ATTTCTGCCCGAGAAAAAGAAGCGGATAAAGTGCAAGCTCTGGATGCCGGCGCGAACGACTATTTGACTAAACCCTTTGG
CAGTGAAGAGTTGATGGCTCGTATTCGGGTGGCTCTGCGTTTAGCGCCGAGCACCGAAAGTGTAGAGCAGACTCGTTTTG
AATTGGGGGATCTGGTGTTGGATCTTGTGTTAAAGCAAGTCACCAAGGCTGGAGAGCCAGTAAAACTGACCAAAACCGAA
TACAACATTTTGAAATTGCTAGCAAAAAATATGGGTAAGGTGCTCACGCACAAGCAGATCTTAAAAGAAGTGTGGGGCGG
CAATTATGTCGAGCATCATCACTATGTGCGTATTCATGTCGCGCAGTTACGCCATAAAGTGGAAGACAATCCCGCGCAAC
CGCGCTTCATCCTGACTGAAAATGGGGTCGGTTACCGTTTAGTGGATAAATAG

Protein sequence :
MNSEIKILIIEDEAPIQRFLTVLISGYEYQVKVASTAEQGLHLVANWNPHLILLDLGLPDQDGISLTRELRAWTQTPIMV
ISAREKEADKVQALDAGANDYLTKPFGSEELMARIRVALRLAPSTESVEQTRFELGDLVLDLVLKQVTKAGEPVKLTKTE
YNILKLLAKNMGKVLTHKQILKEVWGGNYVEHHHYVRIHVAQLRHKVEDNPAQPRFILTENGVGYRLVDK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0031 YP_251946.1 hypothetical protein Not tested SCCmec Protein 2e-37 44
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 2e-41 44
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 2e-41 44
kdpE YP_039536.1 response regulator protein Not tested Type-II SCCmec Protein 6e-37 43
kdpE NP_370594.1 transcriptional regulator kdpE Not tested Type-II SCCmec Protein 6e-37 43
kdpE NP_373306.1 hypothetical protein Not tested Type-II SCCmec Protein 6e-37 43
kdeP YP_190033.1 DNA-binding response regulator KdeP Not tested Type-II SCCmec Protein 6e-37 43
kdpE BAA82188.1 KDP operon transcriptional regulatory protein KdpE Not tested Type-II SCCmec Protein 4e-37 43