Gene Information

Name : ctxA (Vch1786_I0953)
Accession : YP_004937111.1
Strain :
Genome accession: NC_016445
Putative virulence/resistance : Virulence
Product : cholera enterotoxin, A subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1041609 - 1042466 bp
Length : 858 bp
Strand : -
Note : -

DNA sequence : 
TTGATTTCAAATAATACAAATTTATTTACTTATTTAATTGTTTTGATCAATTATTTTTCTGTTAAACAAAGGGAGCATTA
TATGGTAAAGATAATATTTGTGTTTTTTATTTTCTTATCATCATTTTCATATGCAAATGATGATAAGTTATATCGGGCAG
ATTCTAGACCTCCTGATGAAATAAAGCAGTCAGGTGGTCTTATGCCAAGAGGACAGAGTGAGTACTTTGACCGAGGTACT
CAAATGAATATCAACCTTTATGATCATGCAAGAGGAACTCAGACGGGATTTGTTAGGCACGATGATGGATATGTTTCCAC
CTCAATTAGTTTGAGAAGTGCCCACTTAGTGGGTCAAACTATATTGTCTGGTCATTCTACTTATTATATATATGTTATAG
CCACTGCACCCAACATGTTTAACGTTAATGATGTATTAGGGGCATACAGTCCTCATCCAGATGAACAAGAAGTTTCTGCT
TTAGGTGGGATTCCATACTCCCAAATATATGGATGGTATCGAGTTCATTTTGGGGTGCTTGATGAACAATTACATCGTAA
TAGGGGCTACAGAGATAGATATTACAGTAACTTAGATATTGCTCCAGCAGCAGATGGTTATGGATTGGCAGGTTTCCCTC
CGGAGCATAGAGCTTGGAGGGAAGAGCCGTGGATTCATCATGCACCGCCGGGTTGTGGGAATGCTCCAAGATCATCGATG
AGTAATACTTGCGATGAAAAAACCCAAAGTCTAGGTGTAAAATTCCTTGACGAATACCAATCTAAAGTTAAAAGACAAAT
ATTTTCAGGCTATCAATCTGATATTGATACACATAATAGAATTAAGGATGAATTATGA

Protein sequence : 
MISNNTNLFTYLIVLINYFSVKQREHYMVKIIFVFFIFLSSFSYANDDKLYRADSRPPDEIKQSGGLMPRGQSEYFDRGT
QMNINLYDHARGTQTGFVRHDDGYVSTSISLRSAHLVGQTILSGHSTYYIYVIATAPNMFNVNDVLGAYSPHPDEQEVSA
LGGIPYSQIYGWYRVHFGVLDEQLHRNRGYRDRYYSNLDIAPAADGYGLAGFPPEHRAWREEPWIHHAPPGCGNAPRSSM
SNTCDEKTQSLGVKFLDEYQSKVKRQIFSGYQSDIDTHNRIKDEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctxA YP_004937111.1 cholera enterotoxin, A subunit Virulence CTX Protein 4e-125 100
VC1457 NP_231100.1 cholera enterotoxin subunit A Not tested CTX Protein 3e-112 100
ctxA YP_001217006.1 cholera enterotoxin, A subunit Virulence CTX Protein 3e-112 100

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ctxA YP_004937111.1 cholera enterotoxin, A subunit VFG0107 Protein 1e-112 100
ctxA YP_004937111.1 cholera enterotoxin, A subunit VFG2037 Protein 5e-96 81