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Name : tcpA (Vch1786_I0334) Accession : YP_004936498.1 Strain : Genome accession: NC_016445 Putative virulence/resistance : Virulence Product : toxin co-regulated pilin Function : - COG functional category : N : Cell motility COG ID : COG2165 EC number : - Position : 367950 - 368624 bp Length : 675 bp Strand : + Note : - DNA sequence : ATGCAATTATTAAAACAGCTTTTTAAGAAGAAGTTTGTAAAAGAAGAACACGATAAGAAAACCGGTCAAGAGGGTATGAC ATTACTCGAAGTAATCATTGTTCTGGGTATTATGGGTGTGGTCTCAGCGGGTGTTGTTACGCTGGCTCAGCGTGCGATTG ATTCGCAGAATATGACTAAGGCTGCGCAAAATCTAAACAGCGTGCAAATTGCAATGACACAAACTTATCGTAGTCTTGGT AATTATCCAGCTACCGCAAACGCAAGTGCTGCTACACAGCTAGCTAATGGTTTGGTCAGCCTTGGTAAGGTTTCAGCTGA TGAGGCAAAGAATCCTTTCACTGGTACAGCTATGGGGATTTTCTCATTTCCACGAAACTCTGCAGCGAATAAAGCATTCG CAATTACAGTCGGTGGCTTGACCCAAGCACAATGTAAGACTTTGGTTACAAGCGTAGGGGATATGTTTCCATTTATCAAC GTGAAAGAAGGTGCTTTCGCTGCTGTCGCTGATCTTGGTGATTTCGAAACGAGTGTCGCAGATGCTGCTACTGGCGCTGG CGTAATTAAGTCCATTGCACCAGGAAGTGCCAACTTAAACCTAACTAATATCACGCATGTTGAGAAGCTTTGTACAGGAA CTGCTCCATTCACAGTAGCTTTTGGTAACAGTTAA Protein sequence : MQLLKQLFKKKFVKEEHDKKTGQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNSVQIAMTQTYRSLG NYPATANASAATQLANGLVSLGKVSADEAKNPFTGTAMGIFSFPRNSAANKAFAITVGGLTQAQCKTLVTSVGDMFPFIN VKEGAFAAVADLGDFETSVADAATGAGVIKSIAPGSANLNLTNITHVEKLCTGTAPFTVAFGNS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tcpA | AAL58332.1 | TcpA | Virulence | VPI | Protein | 2e-79 | 99 |
| tcpA | ACK75601.1 | toxin co-regulated pilin | Virulence | VPI | Protein | 3e-81 | 99 |
| tcpA | AAK20785.1 | toxin-coregulated pilin | Virulence | VPI | Protein | 2e-81 | 99 |
| tcpA | ACK75641.1 | toxin co-regulated pilin | Virulence | VPI | Protein | 2e-81 | 99 |
| VC0828 | NP_230476.1 | toxin co-regulated pilin | Virulence | VPI-1 | Protein | 3e-81 | 99 |
| tcpA | AAK20755.1 | toxin-coregulated pilin | Virulence | VPI | Protein | 2e-73 | 82 |
| tcpA (pilin) | CAA45455.1 | - | Virulence | VPI | Protein | 2e-73 | 82 |
| tcpA | YP_001216309.1 | toxin co-regulated pilin | Virulence | VPI-1 | Protein | 3e-73 | 82 |
| tcpA | ACK75631.1 | toxin co-regulated pilin | Virulence | VPI | Protein | 1e-72 | 81 |
| tcpA | ACK75606.1 | toxin co-regulated pilin | Virulence | VPI | Protein | 2e-71 | 81 |
| tcpA | AAL58335.1 | TcpA | Virulence | VPI | Protein | 1e-69 | 80 |
| tcpA | AAL58331.1 | TcpA | Virulence | VPI | Protein | 2e-66 | 80 |
| tcpA | AAL58337.1 | TcpA | Virulence | VPI | Protein | 5e-68 | 79 |
| tcpA | ACK75621.1 | toxin co-regulated pilin | Virulence | VPI | Protein | 7e-70 | 79 |
| tcpA | ACK75616.1 | toxin co-regulated pilin | Virulence | VPI | Protein | 8e-71 | 79 |
| tcpA | AAL58336.1 | TcpA | Virulence | VPI | Protein | 1e-68 | 78 |
| tcpA | AAL58338.1 | TcpA | Virulence | VPI | Protein | 4e-65 | 78 |
| tcpA | ACK75611.1 | toxin co-regulated pilin | Virulence | VPI | Protein | 2e-70 | 78 |
| tcpA | ACK75626.1 | toxin co-regulated pilin | Virulence | VPI | Protein | 7e-67 | 78 |
| tcpA | AAL58334.1 | TcpA | Virulence | VPI | Protein | 2e-68 | 77 |
| tcpA | AAL58339.1 | TcpA | Virulence | VPI | Protein | 3e-64 | 77 |
| tcpA | AAF65209.1 | toxin coregulated pili subunit | Virulence | VPI | Protein | 9e-68 | 77 |
| tcpA | AAL58333.1 | TcpA | Virulence | VPI | Protein | 2e-66 | 76 |
| tcpA | ACK75636.1 | toxin co-regulated pilin | Virulence | VPI | Protein | 6e-59 | 72 |
| tcpA | AAL58330.1 | TcpA | Virulence | VPI | Protein | 4e-57 | 70 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| tcpA | YP_004936498.1 | toxin co-regulated pilin | VFG0091 | Protein | 1e-81 | 99 |
