Gene Information

Name : viuC (Vch1786_I0285)
Accession : YP_004936449.1
Strain :
Genome accession: NC_016445
Putative virulence/resistance : Virulence
Product : vibriobactin and enterobactin ABC transporter, ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 313166 - 314005 bp
Length : 840 bp
Strand : +
Note : -

DNA sequence : 
ATGGACACAATTTGGGATGCTGACTTACAGAGCGCTGCATTAAAGGCTGAACATCACAGGCTTAAGACTGAGCGACTGAG
TTTAGGTTATGAAGGAAAATCGGTGTGTGATGCGCTGGATTTGGCGATTCCGCACGGGAAATTTTCGGTGATAGTTGGGC
CTAATGGCTGTGGTAAATCGACCTTGCTAAAAAGCTTGTGCCGTTTACTCAAGCCGCTGGCTGGGCAAGTATTACTGGAT
GGTCAGAATATTCACCAATTGCCGACCAAGGTGGTAGCCAAGCAGCTAGGATTACTGCCTCAAAGCGCGTTGACACCCGA
AGGGATAAAGGTGGTCGATTTGGTCTCTCGTGGCCGTTATCCTCACCAAGGGCTATTTCGCCAATGGAGCAGGGTGGATG
AACGAGCGGTAGAAGAGGCGATGCGAGCCACTCACGTCCATGAGCTTGCGCAGCATAGTGTGGATCAGCTTTCCGGCGGT
CAGCGTCAGCGGGTTTGGGTCGCCATGGCGCTGGCGCAGCAAACGCCGTATTTACTGCTTGATGAACCAACCACTTATCT
TGATATTGCTCACCAAATCGAACTGCTCGATCTCTTTTGGCGGCTTAATCGTCAGCAAGGGCATACTCTAGTCGCCGTGC
TGCACGATCTGAATCAGGCGTGTCGTTACGCCGACCATCTGATTGTGTTGCAAGAAGGCAAAATCGTCGCGCAGGGCGAT
CCACACTCTTTGGTGACTCCAGCATTGGTTAAGCAAGTCTTTGGGATTGATTGTGTCGTTATGCCCGATCCTATCTCCTG
CACGCCTTTGATTATACCTTATTCGTTAAAGCGCGGTTAA

Protein sequence : 
MDTIWDADLQSAALKAEHHRLKTERLSLGYEGKSVCDALDLAIPHGKFSVIVGPNGCGKSTLLKSLCRLLKPLAGQVLLD
GQNIHQLPTKVVAKQLGLLPQSALTPEGIKVVDLVSRGRYPHQGLFRQWSRVDERAVEEAMRATHVHELAQHSVDQLSGG
QRQRVWVAMALAQQTPYLLLDEPTTYLDIAHQIELLDLFWRLNRQQGHTLVAVLHDLNQACRYADHLIVLQEGKIVAQGD
PHSLVTPALVKQVFGIDCVVMPDPISCTPLIIPYSLKRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-58 53
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-58 53
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-58 53
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-58 53
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 6e-53 51
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 6e-53 51
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 7e-48 49
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 6e-54 46
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-46 45
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 9e-49 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 9e-49 43
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 9e-49 43
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 9e-49 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
viuC YP_004936449.1 vibriobactin and enterobactin ABC transporter, ATP-binding protein BAC0164 Protein 4e-48 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
viuC YP_004936449.1 vibriobactin and enterobactin ABC transporter, ATP-binding protein VFG0925 Protein 8e-69 58
viuC YP_004936449.1 vibriobactin and enterobactin ABC transporter, ATP-binding protein VFG1042 Protein 4e-48 49